Gene YPK_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1830 
Symbol 
ID6088038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2028717 
End bp2029475 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content47% 
IMG OID641596898 
Productvitamin B12-transporter ATPase 
Protein accessionYP_001720574 
Protein GI170024069 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4138] ABC-type cobalamin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATTGC AACTCAACAA TGTCAGCGTA GGAACCCGCC TTGCTTCTTT TTCTTCGCAG 
GTGACCACGG GGTTGCAAAT TCATTTGATT GGCCCGAATG GGGCAGGGAA AAGCACTTTG
CTGGCCTCGT TGGCGGGGTT ATTGCCTGCT AGCGGCGAAA TTGTGTTAGC GGGTAAATCA
TTGCAACACT ATGAAGGGCA TGAATTAGCC CGTCAACGGG CCTATTTATC TCAGCAGCAG
TCCGCATTGT CCCTGATGCC GGTTTTCCAA TATCTTTCTC TTTATCAACC CGCCGGTGCT
AATTCACAGG CTGTGGCAAC AGCGATTAGC TATATCTGTA ATAAGCTGCG TTTAACCGAC
AAATTACCGC GAATGCTGTC ACATCTTTCA GGTGGTGAAT GGCAACGCGT GCGGTTAGCT
GCGGTATTTT TGCAGGTTTG GCCGGATATC AACCCTGACA GTAAATTATT GTTGCTGGAT
GAACCCTATA GTGGCCTGGA TGTTGCCCAG AAAGTGGCTT TAGATGCTTT ATTAGTGGAA
TTTTGTCGGT CAGGGCGCAG TGTTATCATC AGTGGCCATG ACCTCAATCA TACGTTACAG
CAAGCTGACG AAGTATGGTT GCTGGCTCAA GGGCAAGTAT TAGTGCAAGG AGAAACCCAG
CAAGTCATGC GAGCGGATGT GCTCTCCCAA GTATTTGAAG TTGATTTTCA AATACACAAT
TTTAATAAAC AGCAGTGGAT TACCACAAGA AGCGTATAA
 
Protein sequence
MLLQLNNVSV GTRLASFSSQ VTTGLQIHLI GPNGAGKSTL LASLAGLLPA SGEIVLAGKS 
LQHYEGHELA RQRAYLSQQQ SALSLMPVFQ YLSLYQPAGA NSQAVATAIS YICNKLRLTD
KLPRMLSHLS GGEWQRVRLA AVFLQVWPDI NPDSKLLLLD EPYSGLDVAQ KVALDALLVE
FCRSGRSVII SGHDLNHTLQ QADEVWLLAQ GQVLVQGETQ QVMRADVLSQ VFEVDFQIHN
FNKQQWITTR SV