| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1648 |
|---|
| Symbol | |
|---|
| ID | 6091045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1831229 |
|---|
| End bp | 1832233 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641596718 |
|---|
| Product | CRISPR-associated Csy3 family protein |
|---|
| Protein accession | YP_001720394 |
|---|
| Protein GI | 170023889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02566] CRISPR-associated protein, Csy3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG CAACGATTAA AACCGCTTCT GTACTGGCAT TTGAACGTAA GTTATCCAAT
TCCGACGCCA TGATGTATGC CGGGAACTGG GGGCAAACCG ACAATTGGCA GCCTATCATC
ATTAAAGAAA AAGCGGTGCG GGGCACCATC TCCAACCGGT TGAAAAATGC CCTGGCATCT
GATCCGGTAA AACTGGATGC AGAGATCCAA AAAGCAAACT TACAACGTGT AGATGTGGCC
GCACTGCCGT TTGATACTGA CACCCTGAAA ATGAGTTTTA CACTGCGGGT GCTGGGCAAC
CTCGCTACGC CATCAGTGTG TAATGATCAA GAATATCAGG CTGAACTGGC CAGTGTTATT
AATGGCTATA TCAGTGAGCA GAGTTTTAGT GTGCTGGCGG CGCGCTATGC CGAGAATCTG
GCTAATGGCC GTTTCTTGTG GCGCAACCGG GTTGGGGCTG AAGATATTAA AGTGTGTATC
ACCAGCCAAA CGAAGAGTTA TCAATTTGAT AGCAATGAAT TTAGCTTGCG TCAATTTAGC
CAACCCAGCA AGGAACTGAC TGCGCTGGCA CAAGAAATAG AACAAGGTTT AGCGGGCAAC
GGTTTTGCCT TTTTCACCGT TGATGCTTTT GTTCGTTTAG GTAACGGGCA GGAAGTGTTC
CCGTCTCAGG AGTTGGTGCT GGACAGCAAC AGTAAGAAAA GCAAAGTGTT ATATCAGATT
GATGGTATTG CGGCCCTGCA TTCACAGAAA GTGGGTAATG CGTTACGTAC CATTGATGAT
TGGTATCCAG ATGCCACTGA GTTGGCTTTG GGGCCGATTG CCGTTGAACC CTATGGCTCG
GTGACCAGCC GGGGTAAAGC CTATCGGCAG CCAAAACAAA AAATGGATTT CTACACCTTA
TTGGACAACT GGGTGACAAA AGGCACGGTA CCGGCGGTCG AACAGCAACA TTATGTGATG
GCAACCTTGA TCCGTGGTGG TGTCTTTGGT GAGAAAGGCG AATAA
|
|---|
| Protein sequence | MAKATIKTAS VLAFERKLSN SDAMMYAGNW GQTDNWQPII IKEKAVRGTI SNRLKNALAS
DPVKLDAEIQ KANLQRVDVA ALPFDTDTLK MSFTLRVLGN LATPSVCNDQ EYQAELASVI
NGYISEQSFS VLAARYAENL ANGRFLWRNR VGAEDIKVCI TSQTKSYQFD SNEFSLRQFS
QPSKELTALA QEIEQGLAGN GFAFFTVDAF VRLGNGQEVF PSQELVLDSN SKKSKVLYQI
DGIAALHSQK VGNALRTIDD WYPDATELAL GPIAVEPYGS VTSRGKAYRQ PKQKMDFYTL
LDNWVTKGTV PAVEQQHYVM ATLIRGGVFG EKGE
|
|---|
| |