| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1641 |
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| Symbol | |
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| ID | 6088503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1819765 |
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| End bp | 1821009 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641596711 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001720387 |
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| Protein GI | 170023882 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAA GAATAAGCCA GTGGCTGGAA AGATTGGGGA TGGAGTTCTC CGATGTGATG
TCATTGACGA TGGTGATTGG GCTAATATTA TTGATTTCTG TGATGATCCA TCTGGTGCTA
CACCGTGTAG TTCTGGCCGC CCTCCAGCGC CGTGGGCAAC AATCGCAACG CATCTGGCAA
CAGGCCATCA CAAAACACAA ACTGTTCCAA CGCGTAGCGC TACTGCTGCA AGGGATCATC
ATCAATCTCC AGGCCGTACT GTGGTTGCAA AACGGCAGCC AGACGCAGGC AGTTATCGTT
ACCGCCGCGC AGGTGTGGAT TATGGCCTTC GCTCTGCTGG CTCTATTTTC TTTACTTGAT
ACCTTGCTAG CCCTGCTCCG CCAGAGTTCA GTTGCTCATC AATTACCCCT GCGCGGTATC
TGCCAAGGGC TGAAACTGGT GGCTGCGATA TTTATCGGCA TCATGATCGT TTCGCTGTTG
ATGGGCCGAT CACCCCTGTT GCTACTCAGC GGCTTAGGGG CCATGACGGC AGTATTGATG
TTGGTGTTCA AAGACCCAAT CCTTGGTCTG GTGGCAGGTA TTCAGCTCTC TGCTAACGAT
ATGCTAAAAA TTGGCGATTG GCTGGAAATG CCAAAATATG GGGCTGATGG CGCAGTGACC
GATATTGGCC TGACTACAGT AAAAGTAAGA AATTGGGATA ACACCGTCAC GACCATCCCA
ACTTATGCGC TTATTTCCGA TTCCTTCAAG AACTGGCGCT CAATGTCGGA ATCCGGTGGC
CGACGTATAA AACGCAGCAT CAATATTGAT ACCACCAGCG TACATTTTCT GTCAGAACAG
GAACAACAGC GCCTCACCCT CAACCCGCTG TTACAACACT ACCTCAGTGA AAAATCGCAG
GAACTGAACC AATATAATCA GCAGATAGCC CTCGACCTCA GTTCACCACT CAATGGCCGC
CGCCTGACTA ACATTGGAAC GTTGCGCGCC TATCTGGTGG CTTATCTGCG GGCACATCTG
GGGATCCATC AGTCGATGAC ATTAATGGTG CGCCAACTTG CCCCAACACC CGAGGGCTTG
CCGCTAGAAG TTTATGCTTT TACCAACACC ACGATATGGG CAGAATACGA AGGTATTCAG
GCAGATATTT TTGACCACAT CTTTGCCGTG GTGAGTGAGT TTGATCTGCG AATCCACCAA
ACACCAAGCG GTAACGATAT GCGCAGTATG CTTGCCAAAG TCTAA
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| Protein sequence | MQQRISQWLE RLGMEFSDVM SLTMVIGLIL LISVMIHLVL HRVVLAALQR RGQQSQRIWQ
QAITKHKLFQ RVALLLQGII INLQAVLWLQ NGSQTQAVIV TAAQVWIMAF ALLALFSLLD
TLLALLRQSS VAHQLPLRGI CQGLKLVAAI FIGIMIVSLL MGRSPLLLLS GLGAMTAVLM
LVFKDPILGL VAGIQLSAND MLKIGDWLEM PKYGADGAVT DIGLTTVKVR NWDNTVTTIP
TYALISDSFK NWRSMSESGG RRIKRSINID TTSVHFLSEQ EQQRLTLNPL LQHYLSEKSQ
ELNQYNQQIA LDLSSPLNGR RLTNIGTLRA YLVAYLRAHL GIHQSMTLMV RQLAPTPEGL
PLEVYAFTNT TIWAEYEGIQ ADIFDHIFAV VSEFDLRIHQ TPSGNDMRSM LAKV
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