Gene YPK_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1581 
Symbol 
ID6090183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1750220 
End bp1750735 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content51% 
IMG OID641596651 
Producthypothetical protein 
Protein accessionYP_001720327 
Protein GI170023822 
COG category[S] Function unknown 
COG ID[COG4702] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.205238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAC AGCAACAACT CGCCTACTGT CAGCAGCACC AACAACGCTT GCAACTGAGG 
CATTTCGATA ACGAAACCGC CTGGCAGCTA GGCGAAAAAA TAAAGCGACA GGCAGAGAAA
CAAGGCGTGG CACTGGCTAT TGATATCACC GTGAATCATC AAACGCTCTT TAGCTATGCG
ATGGCGGGCA CCTGTGCCGA GAACCAAGAT TGGCTGCGGC GTAAACGTAA TGTCGTGGAG
TTACTCAGCA CCAGTTCCTA TGCTGCCGGG TTGATGTTAC AGCAGCGAGA GACCTCACTC
GACGCTCGCT ATGGCGTGAG TCTGCGGGAT TACGCCGCAT TGGGTGGTGC TTTCCCGCTG
CAAATTAAAC AGGCAGGTAT TATCGGCAGC GTTAATGTTT CCGGTGCACC GCACTTGGAT
GACCACAATT TACTGTTACA GGTACTGGCC GACTTTATCG GCCTGCCCAT TGGCAGCATT
GAACTTTTGA CCCCATTAAC CCCATTGAGC GCATAA
 
Protein sequence
MNLQQQLAYC QQHQQRLQLR HFDNETAWQL GEKIKRQAEK QGVALAIDIT VNHQTLFSYA 
MAGTCAENQD WLRRKRNVVE LLSTSSYAAG LMLQQRETSL DARYGVSLRD YAALGGAFPL
QIKQAGIIGS VNVSGAPHLD DHNLLLQVLA DFIGLPIGSI ELLTPLTPLS A