Gene YPK_1465 details

Gene Information

• Locus tag: YPK_1465
• ID: 6090723
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1618395
• End bp: 1618997
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641596534
• Product: LuxR family transcriptional regulator
• Protein accession: YP_001720211
• Protein GI: 170023706
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAGTG TGGCGATTAA AACCCGTAAT GCTTTCTATG AGTTCGGGTT ACTCTCTCTG 
CTCAAGAAAG TTCTTATAAA AGAGGATGAT ATGGATTATT CCATTGTCCC CTCTCATGAA 
AAAAGAGCTT CAAACAACGC GAATGTGATA TTCAAAGATC TCATGGTGAT TGTTAACATA 
TACCAAGAAA ATAGTTTTAT ACAGAAAAAC GATAGCAATA ATAATAAACC TATGATGACG 
GTTAATATTC CATTTAACAG CAGTCAGTTA GGGCTTTATG ATGTCATCTC TAAAATCAAG 
AAAATTCTGA ATATTGCGCG TCTGAATTAT AATATGATGA TGAAAAGTGA CCTGCAAAGA 
AGGATTGGTT TGAAAAACTA TATACAACTT TCGATGACGG AAAGTAAAGT TGTGCAACTC 
ACCGGGAAAG GGCATAGCAC GACCGATATA TCGAAAATAC TTGACCGCTC TGAAAAAACG 
ATATTGACCC ATCGTAGAAA TGCCATCAGA AAGTTGGGCA TGTTCAATCG GTTAGAGTTT 
TATAAGTATG CATCACTAAT GCGAAATTAC AGTAATAAAG ACGCTGTTTT TATTTGCCTT 
TAA 

 

Protein sequence

MFSVAIKTRN AFYEFGLLSL LKKVLIKEDD MDYSIVPSHE KRASNNANVI FKDLMVIVNI 
YQENSFIQKN DSNNNKPMMT VNIPFNSSQL GLYDVISKIK KILNIARLNY NMMMKSDLQR 
RIGLKNYIQL SMTESKVVQL TGKGHSTTDI SKILDRSEKT ILTHRRNAIR KLGMFNRLEF 
YKYASLMRNY SNKDAVFICL