Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1442 |
Symbol | |
ID | 6088742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1593803 |
End bp | 1594681 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641596511 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001720188 |
Protein GI | 170023683 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTATT CCCCTGAGGC ATTGATTGCT TTTGTTGAAG CCGCGGCCCT TGGATCTTTC TCAGCCGCCG CCCGTAAGCT GCGTAAAAGC CAATCAACCA TCAGCACTGC TATCGCCAAT CTGGAAGCGG ACCTTGGCTT AACCCTATTT GACCGACAAG CCCGTCAGCC AGTGTTAACC GATCACGGTC GCCGTGTGTT GGCTCACGTA CAAGAGATTT TGGCCGCCGG TGAGCGCCTG ACTGATTTAT CTATCCGTCT GGCGGGTCAA GTTGAGACGC GATTAACATT CGTTCTATCT GATACCTATT ATCAGCCAGC ACATCATGAA AATCTGCTAC GCCGCTTTGA GCAGCGCTAC CCTGATGTCG AATTCGAATG TCTGGTTGCC GAAGATGAAG ATGTCATTGA CCTCTTGCAA CTCAAACGCG CCCATATCGG TGTAGTGGAA ATGCAAGAAC GCTATCCCCC GGATATTGCG GCCACTCGGC TGGCCGCACA GACTGAAATG GCGGTGTTTG TGCTACGCGG TCATCCTCTG ACCAGACTTC CTCACCTGAA AAATGAGCAA CTGGCCACCA CACGTCAGCT GTGTCTGAAC ACCTATAACC GCACTGATCA TAATCAATCT CAAGGTTTGA CATGGTCCGC CCCCAGCTAT TTGATGTTGC TAGAGATGGC TGAGCAAGGC TTTGGCTGGG CGATCTTACC CCGTTGGCTG GTAGAACAAT TCGGGCGTGA AAAACTGGTG ACTTTGCCGG TGCAAGGCTG GCCAAAAATG ATCTCCATTG ATGCGGTTTG GTCGAAAAAA AGCCCACCGG GGCCTGCTGG CTATTGGCTA TTAGATCAAT TAACGGAAGG CACTAACTCA CCACACTGA
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Protein sequence | MHYSPEALIA FVEAAALGSF SAAARKLRKS QSTISTAIAN LEADLGLTLF DRQARQPVLT DHGRRVLAHV QEILAAGERL TDLSIRLAGQ VETRLTFVLS DTYYQPAHHE NLLRRFEQRY PDVEFECLVA EDEDVIDLLQ LKRAHIGVVE MQERYPPDIA ATRLAAQTEM AVFVLRGHPL TRLPHLKNEQ LATTRQLCLN TYNRTDHNQS QGLTWSAPSY LMLLEMAEQG FGWAILPRWL VEQFGREKLV TLPVQGWPKM ISIDAVWSKK SPPGPAGYWL LDQLTEGTNS PH
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