Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1288 |
Symbol | |
ID | 6089422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1415834 |
End bp | 1418254 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641596356 |
Product | beta and gamma crystallin |
Protein accession | YP_001720039 |
Protein GI | 170023534 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATATA ATCGTAACCA TATGCTAACG TTAATGTTCT CTTTATTAAT TTTTGATGCC TATGCAAATG AACCCAAAGT CTGTTTTTAT ATGGATGATG ACTATAATGG TGAGTCTCTC TGCGCGGCTC AAGGGAACTC AGTTGCCAGT ATTCCGGATA AATGGAATGA TCGCATATCC TCAATTTCCA TTCCCCACGG TTTAGTTGTC ACCGTCTATG AAGATGTCGA TTTTTTGGGC GCTTCTCGGT CTTTTGAAGC CGATGTGGAT TTGGTTTCAG ATAAGGATTT GATATATTTA AATGATAATA TAAGTGCATT TAAAATAAAA AAGGCAGTTT GTTTTTATGG CGAAAGTAAC TTTACAGGTG ACTCGTTGTG CTTATCTGGT GGTGAGCAAT TTGACTTGTA TCGTGGTAAC TATCCTGAAA GGAAGCAATC TCATTTGGTA AATCCCTTAA ATGATGAGGT ATATTCAATA AAAATCCCTC CAGGAATGCA AACTACAGTC TATGAGGACG ATGATTATAA TGGTAAATAC TTTGTTTTGA CAGAGGATTA CACACCTGAT GATTTGTTGA TAATAAGAAT GAACAATAAA ATCAGTAGCA TGCGAGTTTC TCAAGATGAA GATTTCATTT GTGATCGTTT CTGTTCTATA AAAAAATCAA TTAAATTTAA AATACAAAAA AGTTTTGGTT CCTATTGGAT TGACCCACGA ATAAAATACA GAGATATATT GCTCGATTTT CAGTTATCTG ACACTGATGA TTATTCAATA AAATTTTTTG ATGAGGGTCT TATAAAAGTT AAAAATTATA AATTATTTTT CTTTGATGGT AATGAAAAAC ATGGTGAGGG TTTTTTGTTT AATTTAAGTG ACAAAAGTAG TAATTTGTCA TTTTTATTGC GTTTTAACGG TGGTTTTTTT AAAATTCAAT TTGTTGAATC ATTAAATAAT GAAATTGTTT ATTCTTCTAC TTTGATTGGA ACGTTATTTG ATGATGCTAA CTCAGATGTT ATTTTTGATA TCAATAATGT AGATGCAAAT AGCCCAATCG TTATTGATAA AATGGTATTA ACCGTTGGTA AGGAGCATAA CCGGGCTGAA CGTAGTACTC TGGGGCTAGC GACTTGTTGG GCAATACCCA TACTGAGTAT TTATAACTAT ATTGTTCAGG GGCATTGCAA TCAGGCAGAT AAGTTTGTCC ATAATGCTGC CGATTTTTTT GGTAGCCCGG CAGATAAGAT ATTACAAGTA TTTGGTTCCT CTTTACCCTT ACCCCCAAAA AATAGCAATG AAACATTAGA TGACGAATCT GCATTAATTA ATTTTATGTC TGATGTTAAA GGGACGTTAA CCTATATTAC GACCAATATG GGCGAACACG CATTAACCGT ACCGGCAACG GCACTCGCGT GCAAAGCCTC AATGCGAGAG AAAATCCTGC CTCATCTGCG TAACCGACGT GATCTTGCTC CAGGGTGTAT CGATTGGACT TTGAGTATTT TAACCGATTT TACCTTGTTG TTTGGTGCCA GCATTGAGTA TTGGAATAGC AAAAATTTTG GGCGAGTAAT AGAAAATATT GTTCGCGAAG GGGAGATCGG TTCTGCTGTG GCAGATGTGG ACACCGCATC ACGTTTAATC GAGTCAGTTC AGGCCCATGT GGCTGAAGCG ACAGAGGTTG CAGATATCAT TCATCTCAAA ACGGCATTCG ACTTTTCTCA ACTCAGTTAT GTCAGTTATG TACGTCATAC CGAAGAAGAA GTGGTATCGC CACAAAGCGC GCAGGCGCTA CCCTTAGGGC GTTATGAACT GGCACTGGTA GATTACCATT TTATCGAGAC GGTACCCAGA ATTCGTCAGG ATGGCCGTTG GGTAGAACGT CCAGATCTGC ATTTTGATAT TGAAGTGATT AGCGGGGTTC CCGAAGAAAC TGATGCGAGC CGGCAAGTGC TTTTGCCGAT TATCGAAGCG TGGCAGCATA GCTATCGCCA ACAAGAATTA CTTTTTCACG CCTCGGATAT TCTTCCAGAA AGTGGCCTGG CTCGATATGA AATTGAGCCG TTGTTAGAGG CTTCACGGCT GACCAGCGAA GTTGCAATCA GTTGGTTAAG GACTAGCCGT GATGATTTTG TTTACGTCGT AGTCCGTTTG GAGGGCGAGG TTATTAGCCT CACCATGGCA GTCGATATCA ATATTAATGA TGTGGGGGTT GCCGGGTCAT TAACCAATCC AGATTATGTA ATAACACCTA ATGCAGAAGG GGCCGTCAGA GGCGCGGGTA CGGCGGCGAT CCGAGCATTA GCTGACCACT TTAAACGCAA AGGGAAAATA TCCTTGGTCT CTTCTGTTAT TAGTCAGCCA TCCGCGATTG TGAAGAAAAA AGTGGGTTTT AGATTTATTG AAGAACTTTA A
|
Protein sequence | MRYNRNHMLT LMFSLLIFDA YANEPKVCFY MDDDYNGESL CAAQGNSVAS IPDKWNDRIS SISIPHGLVV TVYEDVDFLG ASRSFEADVD LVSDKDLIYL NDNISAFKIK KAVCFYGESN FTGDSLCLSG GEQFDLYRGN YPERKQSHLV NPLNDEVYSI KIPPGMQTTV YEDDDYNGKY FVLTEDYTPD DLLIIRMNNK ISSMRVSQDE DFICDRFCSI KKSIKFKIQK SFGSYWIDPR IKYRDILLDF QLSDTDDYSI KFFDEGLIKV KNYKLFFFDG NEKHGEGFLF NLSDKSSNLS FLLRFNGGFF KIQFVESLNN EIVYSSTLIG TLFDDANSDV IFDINNVDAN SPIVIDKMVL TVGKEHNRAE RSTLGLATCW AIPILSIYNY IVQGHCNQAD KFVHNAADFF GSPADKILQV FGSSLPLPPK NSNETLDDES ALINFMSDVK GTLTYITTNM GEHALTVPAT ALACKASMRE KILPHLRNRR DLAPGCIDWT LSILTDFTLL FGASIEYWNS KNFGRVIENI VREGEIGSAV ADVDTASRLI ESVQAHVAEA TEVADIIHLK TAFDFSQLSY VSYVRHTEEE VVSPQSAQAL PLGRYELALV DYHFIETVPR IRQDGRWVER PDLHFDIEVI SGVPEETDAS RQVLLPIIEA WQHSYRQQEL LFHASDILPE SGLARYEIEP LLEASRLTSE VAISWLRTSR DDFVYVVVRL EGEVISLTMA VDININDVGV AGSLTNPDYV ITPNAEGAVR GAGTAAIRAL ADHFKRKGKI SLVSSVISQP SAIVKKKVGF RFIEEL
|
| |