Gene YPK_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1258 
Symbol 
ID6088062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1386292 
End bp1387359 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content51% 
IMG OID641596326 
Producthypothetical protein 
Protein accessionYP_001720009 
Protein GI170023504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAGT GGTCTATACG CTGTGTGATT AAAAAGACCG TCTCTTTGTC ATATCCGATA 
TCTAGTGGAG TCGTGAAACA GACCGGTCTC TCTGGCAGAG GGATTTTTTG GGGAGCGTTA
TTACTGACTC CGCTATTGCT CACCGGGTGT ACTGATAACC GGGCTGCGAA CCGCTTTTCC
CAAGCTGTTC AGTTAGTGAT ACCAGAAACA AAAATCGTTG ATTATCGGAC ATTATCCTGC
GACGTATTGT GGGGGCTGGA TGACAAAGAG ACACTAGAAA ACTCCCTTTA CTGGCTAAGG
TCGATGGATT GTGCTGAACG CCTTGGCTCG CCACAGGCAC GGGCGATGGC TAAGACATTG
CCCGTAACAA CCTGGTCCTC AGCTTTTAAA CAAGGTATTT TGATCGGCAG TGCTGAGCCG
TCAATGGCAG AGCGGCGGCA GGTGGTTGAA CGTCTGAATA GTTATAGCCA AACCTTCCCG
GTTGCAGTGC GGCCACTCAT TCAATTGTGG CGTGAGCAGC AGGTCTTGCG GATTGCCTTA
GCGGAAGAGC GTATTCGTTA TCAACGGCTA CAGGATGAAT CAGATGCTCA AATTGATCGT
CTGCGGGAAA ATCAGGTCCG GTTGCAATAC AACTTATTGG ACACCACCCG CAAGCTGGAA
AACCTGACCG ATATCGAACG GCAACTTTCA TCGCGTAAGC AGCTACAAAA TGAAATTCCG
GAAACGGATG CAGAGGCGAA GTCAGCGGCA GAGGCTAAAT CCGCTGAAAA TCAGCCTGCA
GCGGCTAAGC CAGCTGAAAG TAAACCCGCT GAAACCAAAC CAGCAGAAAC CAAACCAACA
GACACCAAAC CAACTGAAGC TCAGCCGGTT GCCCCTAAGT CAACCGGTGT GAAGCCGGCA
GAGACCAAAC CTGAGGCAGT TCAGCCGGGC AGTAAATCAG CACCACCTGT GGTAGAAAAA
CCGGCTGAAC CGCATACACC GCCAGTGGTT CGGCCTGCAG ATGTACCACC TGCGTCTAAT
AAGGAATCTC ATGACACCAC GCAAACCGGC CAATCTACTG CTGGTTGA
 
Protein sequence
MYKWSIRCVI KKTVSLSYPI SSGVVKQTGL SGRGIFWGAL LLTPLLLTGC TDNRAANRFS 
QAVQLVIPET KIVDYRTLSC DVLWGLDDKE TLENSLYWLR SMDCAERLGS PQARAMAKTL
PVTTWSSAFK QGILIGSAEP SMAERRQVVE RLNSYSQTFP VAVRPLIQLW REQQVLRIAL
AEERIRYQRL QDESDAQIDR LRENQVRLQY NLLDTTRKLE NLTDIERQLS SRKQLQNEIP
ETDAEAKSAA EAKSAENQPA AAKPAESKPA ETKPAETKPT DTKPTEAQPV APKSTGVKPA
ETKPEAVQPG SKSAPPVVEK PAEPHTPPVV RPADVPPASN KESHDTTQTG QSTAG