Gene YPK_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1239 
Symbol 
ID6090324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1364287 
End bp1365126 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content46% 
IMG OID641596307 
Producthypothetical protein 
Protein accessionYP_001719990 
Protein GI170023485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTAG ACCCGCGCAT AATCTCGTTA TCAATAGAAA TCGATGGCAA GTTACACGTT 
TACACCGATC TCTATATATC AGCATCCGGG CAAAAAACAG CGGGTTCGTT GCAAAATGAA
TGCACGATAA AAATTGCTAA TCTTAAACAG TCTGACCGCA ATTTTCTGAT CACAGAAACA
TCACCGCTCA ACCGCCCGCG CAGGCGCAAG AAAATTATTC TATTCGCAGG GCGTAAAAGC
TACGGTACGT TTAAGGTTTT TGAAGGGGAC ATTATCGGAT GCACCCCGAG CCAGCCACCT
GACATCATGC TCACAATGAA AGCGCGCACT GGTGCTTTCT TTATGACAGA CATGCTCAGT
TCAAGTTATG CAGCAGCGGT GCCACTCAGC AAAATAGCCG CCGACACTGC ACAGAGCATG
GATTTAACCC TCGATTTTCA GGCGTCGGAC AAGAATATCA GTAATTACAA TTTCACCGGG
GCTAAGCTAA AACAGGTTGA TAAGCTAGGT AGCGCAGGCA GCTATAACGC TTACATCGAT
GATGACCGAT TGATTATAAA AAATAGAGAT GTTCCGCTAC TCAATGAGAC CGTCACGCTC
AATAAAAATA CTGGAATGAT TGGCGTCCCT GAGGTCACGG AAGAGGGCGT TAAAGTGAAA
TACCTGCTTG ATCCGTCGAG CCGTCCGGGG GCCAGCCTGA CCATAGAAAG TGATTTAAAT
CCGGCAGCTA ATGGCACCTT TGTTATTTAC AAACTCAGTT ATGACATCAG TAACCGAGAC
ACACCTTTTT ATCACACGGC GGAATGTCGG AGATTGGGGC TATGGCAGAC ACTACTTTAA
 
Protein sequence
MELDPRIISL SIEIDGKLHV YTDLYISASG QKTAGSLQNE CTIKIANLKQ SDRNFLITET 
SPLNRPRRRK KIILFAGRKS YGTFKVFEGD IIGCTPSQPP DIMLTMKART GAFFMTDMLS
SSYAAAVPLS KIAADTAQSM DLTLDFQASD KNISNYNFTG AKLKQVDKLG SAGSYNAYID
DDRLIIKNRD VPLLNETVTL NKNTGMIGVP EVTEEGVKVK YLLDPSSRPG ASLTIESDLN
PAANGTFVIY KLSYDISNRD TPFYHTAECR RLGLWQTLL