Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1197 |
Symbol | |
ID | 6087076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1331575 |
End bp | 1332966 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641596265 |
Product | hypothetical protein |
Protein accession | YP_001719948 |
Protein GI | 170023443 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.786506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGAAAGA AATTTATCCC CCACGAATAC CAAAACCAAA TAATCCTTCA CGAAATAGAC GCCCCCCGCT CAAATGTTTG GGCCGGTATG GGAATGGGTA AAACCGTCGC AACGCTTACT AGCCTTGAAG ATCTGTTTAT GTCTGGCAGT GAAACCCAAC CGACGTTAGT TCTCGCACCT TTGCGGGTTG CTCGGTCTAC GTGGCCAGAT GAAGTGGATA AGTGGGATCA CCTGCGCAAT ATCGAAATGC AACCGGTGGT CGGTACCGCG CAGGAACGTT TAGCTGCGCT GCGTAACCCT AACGCCAGCG TGTTCACCAC CAATTACGAT AATCTCGTTT GGCTGATAGA AGCCCTCAAC GGTGAATGGC CGTTTGGTAC CGTTATCGCC GATGAAAGTA CCCGGCTGAA ATCCTTTCGC CTGCGCAAAG GCGGGAAGCG TGCGGCGGCA CTGGCAAAAG TTGCGCACAG ATCAGGCCGT TGGGTGAATC TCTCCGGTAC CCCTGCGCCA AATGGCTTAC AGGATTTGTG GGGGCAAGCG TGGTTTCTGG ATAAAGGCCA GCGGCTAGGC CGAACATTCA GCGCTTTCAC TGATCGCTGG TTTAACCGCA TCCCGATCGG CACTACCGGT TTTAATAAAA TCGAACCACG AGAGTGCGCA CAGCAGCAAA TGCAAGACGC CCTGCGCGAC GTCACTATCT CCCTTAATGC CGCCGATTGG TTCGACATTG ACGAGCCGAT ACATAGCGTG GTGCGCGTTG GCCTTAGTCC TAAAGCCCGC AGCCAGTACA AAGAAATGGA AAAGGAGATG TTTTTGCAAA TTGGCGACCA CGGTATCGAA GCCATGAACG CAGCGTCTAA AACAATGAAG TGTTTACAGC TTGCCAGTGG CGCTATCTAT ACCGATGAGG CGGGCAACTG GACGGAGATA CATGACGCCA AGCTGCAAGC GTTGGAAAGC ATCATCACCG AGGCCAGCGG TATGCCTGTT CTCGTCGCTT ACCATTTCAA AAGCGACTTA GCCCGCCTGT TAAAAGCCTT TCCCAAAGGT CGCCACCTGG ACGCAGACCC ACAGACGCAG CGAGATTGGA ACGCAGGATT AATACCCGTG CTATTCGCCC ACCCCGCCAG CGCAGGCCAC GGCCTTAATT TGCAGGACGG CGGCAACATT CTGGCGTTCT TCTCCCACTG GTGGGATCTG GAACAGTATC AGCAAATCAT TGAGCGTATA GGCCCCACAC GGCAAGCACA GGCAGGCCAC AAACGCCCGG TATGGATTTA CCACATCATC GCCGAGGACA CGGTAGACGA GCTGGTAAAA GAACGGCGGG ATTCAAAACG CGAAGTACAA GACATCTTAC TTGAGGCCAT GAAAAAGAGG GGCTTACGAT GA
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Protein sequence | MRKKFIPHEY QNQIILHEID APRSNVWAGM GMGKTVATLT SLEDLFMSGS ETQPTLVLAP LRVARSTWPD EVDKWDHLRN IEMQPVVGTA QERLAALRNP NASVFTTNYD NLVWLIEALN GEWPFGTVIA DESTRLKSFR LRKGGKRAAA LAKVAHRSGR WVNLSGTPAP NGLQDLWGQA WFLDKGQRLG RTFSAFTDRW FNRIPIGTTG FNKIEPRECA QQQMQDALRD VTISLNAADW FDIDEPIHSV VRVGLSPKAR SQYKEMEKEM FLQIGDHGIE AMNAASKTMK CLQLASGAIY TDEAGNWTEI HDAKLQALES IITEASGMPV LVAYHFKSDL ARLLKAFPKG RHLDADPQTQ RDWNAGLIPV LFAHPASAGH GLNLQDGGNI LAFFSHWWDL EQYQQIIERI GPTRQAQAGH KRPVWIYHII AEDTVDELVK ERRDSKREVQ DILLEAMKKR GLR
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