Gene YPK_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1154 
Symbol 
ID6090864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1290933 
End bp1291361 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content51% 
IMG OID641596222 
Producthypothetical protein 
Protein accessionYP_001719905 
Protein GI170023400 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.104519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTT GGTTAATTTA CGCCCTGCTG TCTGCCTTGA GTGCCTCGCT GGTGGCAATC 
TTCGGTAAAA TCGGTCTGCA GCATTTAGAT GCTAATACCG CCACCGCTGT ACGGGCGGTG
GTGATGGCGC TATTTTTAGT CGGCGTGGTC GTGGTTCAGG GGAAATTTAA TCTGGTGGGT
ACCGTGCTGG CCGATAAAAA AGCCCTGTTG TTTATCGTAC TGAGTGGCGT TGCGGGGGCT
TTATCCTGGC TGTTCTACTT TATGGCCATT AAAAATGGCA CGGTTTCGCA AGTGGCTCCC
ATTGATAAAC TCAATGTGGT GTTTGCCGTG CTCTTGGCGT TTATTCTGTT TGGCGAAAAA
ATCTCATTAG TTGCCGGGCT AGGCGTAGCA CTGATTACTG CCGGCGCATT GATGGTGGCT
CTGGGGTAA
 
Protein sequence
MSTWLIYALL SALSASLVAI FGKIGLQHLD ANTATAVRAV VMALFLVGVV VVQGKFNLVG 
TVLADKKALL FIVLSGVAGA LSWLFYFMAI KNGTVSQVAP IDKLNVVFAV LLAFILFGEK
ISLVAGLGVA LITAGALMVA LG