Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1147 |
Symbol | |
ID | 6088305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1285132 |
End bp | 1285974 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641596215 |
Product | DNA-binding transcriptional regulator ChbR |
Protein accession | YP_001719898 |
Protein GI | 170023393 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0420293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGACTA AGATGGACGT CAGATTAGTA CGTGAAAGAG ACTTTTTTAA CGGTAAAGAA TTCCATCTGT TTATTTACAA CAAAACGGAG AGTGCGACCG GTTTACATCA GCATGATTAT TATGAATATA CGCTGATATT AACCGGGATG TGCTACCAAG AAATTAACGG AAAGCGTGTT TTTTTGGAGC GTGGGGACTT TATCTTTATT CCTCTTGGTT CTCATCATCA AAGTTTCTAT GAGTTTGGTG CCACCCGGAT CCTGAATGTC GGGATCAGTA AAGCTTTCTT TGAAGAACAT TATTTCCATT TACTGTCTCG GCCTATTGTG GCCTCTCAGG CGTATCGCTT AAGAGGTGAT TTTCTTTCCT ATATCGAATC GGCGATCTCT GCTCCACACT ACAGAGAAAA TGAGCAAACA GAACTTTTAG AGCTACTGAC CTTTTATGTG ACTAACCGCA TCAGTCATTA CAAAGAGAGT GAAGTTAACG ACGATATACC TTCGTGGCTG AAGGCCACAA TCGACAAAAT GCATGATAAC GCGATGTTTA GTGAGAAGGC GTTGGTGAAT ATGGTCGAGC TTTCTGGCAA AACCCAAGAA TATCTCACCA GAGCGACACG GCGCTATTAT CAGAAAACGC CCATGCAGAT TATCAATGAA ATTAGAATAA ATTTTGCCAA AACCCAACTT GAAGTGACGA ACTATTTAGT TTCGGATATT GCATTTGAAG CAGGCTACAG CGACACCACG TTATTCATCA AAAACTTCAA AAAATTAACC TCTTTTACGC CAGGAAACTA TCGCAAGAAC TTCTACAGCG CCAGAGAGAG TTTATCCCAT TAG
|
Protein sequence | MVTKMDVRLV RERDFFNGKE FHLFIYNKTE SATGLHQHDY YEYTLILTGM CYQEINGKRV FLERGDFIFI PLGSHHQSFY EFGATRILNV GISKAFFEEH YFHLLSRPIV ASQAYRLRGD FLSYIESAIS APHYRENEQT ELLELLTFYV TNRISHYKES EVNDDIPSWL KATIDKMHDN AMFSEKALVN MVELSGKTQE YLTRATRRYY QKTPMQIINE IRINFAKTQL EVTNYLVSDI AFEAGYSDTT LFIKNFKKLT SFTPGNYRKN FYSARESLSH
|
| |