| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1048 |
|---|
| Symbol | |
|---|
| ID | 6088480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1186069 |
|---|
| End bp | 1186896 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641596114 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_001719802 |
|---|
| Protein GI | 170023297 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG CCTATTCCGA AGCTTACCAA CAGCGGTTTG GTGGTATTGC ACGCCTCTAT
GGCCAACAGG CATTGGCGCT TTTTTCACAG GCGCATGTTT GTGTCATCGG TATTGGCGGC
GTAGGCTCAT GGGCGGCGGA AGCATTGGCG CGTACTGGTA TCGGTGCGAT TACACTAATT
GATATGGATG ATGTTTGTGT CACGAATACT AACCGTCAAA TCCATGCTCT GCGCCACAAC
ATCGGGCAGG CTAAAACAGA AGTCATGGCC GAGCGTATTC TGGCCATCAA TCCTGAATGT
CATGTGACTT GTATTGATGA TTTTATTACT GCGGATAATG TCGCTGAGCT TTTAAATAAG
AATTTCAGCT ATGTTATTGA TGCAATTGAT AGTGTGCGCC CAAAAGCTGC GCTGTTGTCT
TACTGCCGTC GCTATAAAAT CCCAGTGGTG ACTACCGGTG GAGCGGGTGG GCAAATTGAT
CCAACCCGTA TTGCCGTGGT TGATCTGGCT AAAACCATCC AAGATCCTTT AGCTGCAAAA
CTGCGCGAAA GACTGAAAAG TGATTTTAAC GTGGTGAAAA ACAGCAAAGG TAAGCTAGGT
ATTGACTGTG TTTTCTCCAG TGAGCCTTTG GTCTATCCAC AAGCCGATGG CTCTGTGTGT
GCATCCCGCA GCACTGCCGA AGGACCTAAA AAAATGGATT GCACCTCTGG ATTCGGCTCG
GCAACGATGG TTACTGCCAC GTTTGGCTTT GTTGCTGTGT CTCATGTATT GAAGAAGATG
ATGGCTAAAG CGGCCCGTCA GCACGAGTCA GCCGCCACTG CGTCATAA
|
|---|
| Protein sequence | MSTAYSEAYQ QRFGGIARLY GQQALALFSQ AHVCVIGIGG VGSWAAEALA RTGIGAITLI
DMDDVCVTNT NRQIHALRHN IGQAKTEVMA ERILAINPEC HVTCIDDFIT ADNVAELLNK
NFSYVIDAID SVRPKAALLS YCRRYKIPVV TTGGAGGQID PTRIAVVDLA KTIQDPLAAK
LRERLKSDFN VVKNSKGKLG IDCVFSSEPL VYPQADGSVC ASRSTAEGPK KMDCTSGFGS
ATMVTATFGF VAVSHVLKKM MAKAARQHES AATAS
|
|---|
| |