| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1014 |
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| Symbol | |
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| ID | 6090622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1139483 |
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| End bp | 1140325 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641596077 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001719768 |
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| Protein GI | 170023263 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATA TACAGGTTTT TTTTGTGAGC TATTTAATTT TTGGGGCCAT GGTAGGCAGC
TTTCTTAATG TTTTAATCTA TAGATTTCCT ATTATGCTGG CTAATTTATC ATCACGATCT
GAGTCACACG GTGAAGAAAT TAAGATGCGT TCTCATTTGA GAAATATTAA TTTATTTCAA
CCCGGCTCTT TTTGCCATCA TTGCAATGAG TCAATACCAA TAAAATATAA TATACCGATA
CTCGGTTGGA TTTTTCTGCG TGGTGCCAGT CGTTGTTGTA ACAAGAAGAT AAGCACCCGC
TATCTATTTA TTGAAGTATT AGCTGTCATT CAAACACTCT TGGTTCTTAT GATTTTTAAA
GAGGACTTAC TTATCTGCAC TAGCTTGGTG CTAATTTGGT CACTTACGGC ATTGGCATTT
ATAGATTTCG ATACCTACCT CCTTCCTGAT TGTATGACAA TACCTTTGCT GTGGCTTGGT
CTTCTTATCA ATATAGATAC GGTTTTTGCA CCACTAACCT CTGCAGTACT GGGTGCTGTC
AGTGGATACC TTTTTCTTTG GCTATCATAT TGGTTGTTTA AAATAGTAAG AGGTGTTGAT
GGAATGGGCT ATGGTGATTT TAAATTAATG GCCGCATTAG GTGCTTGGTT TGGTGTGAGT
GCAGTACCTT TTTTAATATT GTTCTCTTCC TTTTTTGGTC TTGTCGCATA TGCTATTTTT
TATTTTTTTG ATAAAAAAGA TAATGGAAAA GAGATTAATT ACATCGCATT TGGCCCTTAT
ATTTCATTGG CGGGTGTTCT ATACCTGTTT CTTGGGAGTC ATGTGACTAA TTTATTTTCT
TAA
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| Protein sequence | MMDIQVFFVS YLIFGAMVGS FLNVLIYRFP IMLANLSSRS ESHGEEIKMR SHLRNINLFQ
PGSFCHHCNE SIPIKYNIPI LGWIFLRGAS RCCNKKISTR YLFIEVLAVI QTLLVLMIFK
EDLLICTSLV LIWSLTALAF IDFDTYLLPD CMTIPLLWLG LLINIDTVFA PLTSAVLGAV
SGYLFLWLSY WLFKIVRGVD GMGYGDFKLM AALGAWFGVS AVPFLILFSS FFGLVAYAIF
YFFDKKDNGK EINYIAFGPY ISLAGVLYLF LGSHVTNLFS
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