Gene YPK_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1003 
Symbol 
ID6090081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1129682 
End bp1130185 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content29% 
IMG OID641596066 
Productgeneral secretion pathway protein C 
Protein accessionYP_001719757 
Protein GI170023252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAAAGA TAAGACTAAA AAATCCTTTT AGGACACTCA ACTGTAATCA ATTTATATTT 
ATTGAATTGA GTATTGTATT TCTAGTTGCA TTTCATACAG TGATGGTTTT TTGGTCAATT
ATTTATAATG ATAGCAATGA TATGTTTATC TTGTACGATG GGCAGTCCTA CGATAGTCAA
AATTCTACCG AAAAGGCTAA GGTAATAGAC AGTAGTAACT TATCGAAAAT GTTTGATCGT
AAAATAAACA AACCAGATAA AAAAATAGAA ATGAATGATG TTCTTTTTTA TTCTCCAGAA
TATATAGGGG AAATAAAACT GGTTGGCGTA ATTGAACACT CAGCACCATC AGAGTCCATT
GCAATATTGG AAGTAAAGGG AAAGCAAACA ACACATTTAA CAAGGGAGAA TATAAATTAT
GAAGATATAG TAATAGTGAA GATATTTACT GATAGAGTGA TTATCAAGCG TAATGGTAAA
TATTATTCAT TAATAATTAA CTAA
 
Protein sequence
MLKIRLKNPF RTLNCNQFIF IELSIVFLVA FHTVMVFWSI IYNDSNDMFI LYDGQSYDSQ 
NSTEKAKVID SSNLSKMFDR KINKPDKKIE MNDVLFYSPE YIGEIKLVGV IEHSAPSESI
AILEVKGKQT THLTRENINY EDIVIVKIFT DRVIIKRNGK YYSLIIN