Gene YPK_0885 details

Gene Information

• Locus tag: YPK_0885
• ID: 6090469
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1010818
• End bp: 1011351
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641595947
• Product: regulatory CII family protein
• Protein accession: YP_001719639
• Protein GI: 170023134

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTACTT TGGGTGGGTT GACTATGTTT GATTATCAGG TTTCTAAACA TCCTTGTTTT 
GATGTGGCCA TGCGCGGGTT TGCTTTGGCG CATAATCTCA GTGAACTGGC GGGCCGGGTT 
GGGATGAATG CGCAAACGTT GCGGAATAAG CTCAACCCGG AGCAACCGCA CCAGCTTACG 
GTTACTGAAT TGCTTGCGAT CACAGATGCA ACAGAAGACG CCAACCTTAT CGATGCCATG 
TTGGCGCAAA TAAACTGTAT GCCGTCAGTG CCAGTAAATG AGGCCAGCGC TGATAACATT 
TCTACCTACG CGCTTAAAGC AACTGCCGCC GTGGGTTCGA TTGCTGCCGC AGCGGTGCAG 
GGCAATCACA AAACAGCATT CAGCAAATCT GCTCTGCTGG ATAGCGTTAA TACTGCGATT 
CGCCATCTGT CACTGATTGG CCTGACAGTG CAATGTCGTA TTCAGTCAAC CCCTGCTCTT 
GCTTCAACCG TTGATGTTAT TAGCGGGTTG AGTGCTGCCG CCGGTTTGAG TTGA 

 

Protein sequence

MVTLGGLTMF DYQVSKHPCF DVAMRGFALA HNLSELAGRV GMNAQTLRNK LNPEQPHQLT 
VTELLAITDA TEDANLIDAM LAQINCMPSV PVNEASADNI STYALKATAA VGSIAAAAVQ 
GNHKTAFSKS ALLDSVNTAI RHLSLIGLTV QCRIQSTPAL ASTVDVISGL SAAAGLS