| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0746 |
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| Symbol | |
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| ID | 6090583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 820886 |
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| End bp | 822733 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641595807 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_001719500 |
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| Protein GI | 170022995 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAACA TAGGACCAGA CCGTGAAATC CATGCTGACC GGGCAGCAGC AACAGCCTTA
ACTCCGGCTG ACTATTATGC AATATGGGAA AAATGGGAAA ATGATCCAAG AACTGTTGCT
GGTGAACAAC GGGGCCAGGC CGTAGCGAGA ATGAAAGAGT GTTTGGAAAA CAATACCGAA
CGCCTCGATC TCGATGAGCT TGGTTTGACC TCATTACCCG ACACCCTGCC GCCGTGTAAT
GAACTGAATA TTATGGCTAA TAATTTAACT GAGTTGCCGA CAACACTGCC CGACAACCTG
CAAAAACTGA ATGTTTCTTT TAATCAACTG CGTGCATTAC CGAATACATT ACCGGCCTCG
CTGTTATCTC TAAATGTGTT TATGAATAAA CTGGAACGGC TCCCTGAGTC GCTACCTGAA
GGGCTAAAAG AATTAGACGT TAATGATAAT GAGTCACTGC AACTCCCAAA TCGCTTGCCC
CAGAATCTGG AGTCTCTTGG TATTGTAAGC TGTGGCTTAA CTGAACTGCC TACACTGCCG
AACAGTTTGA AAAGACTGGA TGCGGATAGT AATCAACTGC GCACATTGCC CGAGACATTG
CCAATATCGC TGTTAAGGTT AAGTGTAACC AGTAATCAAC TCACACAACT CCCCGAGACA
TTGCCCGCCT CGCTGTCACT TTTAATGGTA TTGGGCAATA GGCTCACCGC ACTACCGGAA
AATTTACCCG GTAGTTTAAG ATGTATCAGC GCTGAATATA ATCAATTATC CCAACTTCCC
GACCTGGCCC GTCTGCCCCA AAACTGTGAA ATTCTCTTGG AAGGTAACCC TCTTTCTACC
AGCACACTGC AGGTACTACA ACATCTCCGT ACTAACCCGT ATTATCAGGG GCCACGGATT
AACTGCAGCG AATTAGACAA TCTACCACCA GCGAGTCTCA GTAACATTGT TGCCACCTGG
TTGCCGCCGG AACAACAAAA TAGGTTGGCA GGAGATTGGG CAAATATCGA GACAGAAGCT
AACTCAGCCG CTTTTAGCGT TTTTCTTCAC CGTTTGACTA CAACTCAAAA CGCAAATAAT
ATCCCTGAAT TTAAACAACA AATTGCGGCA TGGTTGTTGC AACTGGCTGA CTCACCTACT
CTACGTGAGC AGACCTTTCT TATTGCTCAG GAAGCAAGCG CGACCTGTGA AGACCGCATT
ACCTTGACGC ATAACGATAT GCAAAAGGCA GTCATGCTCC ATGAGGTCGA AAAGGGGAAA
TATGATGAAA AACTACCTGA ACTGATGGCG CGTGGCCGAG AGATGTTCCG TCTGGAACAA
CTTGAGAATA TTGCCCGCGA AAAAGTAAAA ATACTAAAAA CACTGAATGT AAATTCAGTC
GATGATATCG AAGTCTATCT CGCCTATCAG GTCAAACTGC TCAATTCCTT ACAGCTCTCC
TCGGTAAACA AAGAAATGCG CTTCTTTGGC GTATCACATG TGACAGCAGA CGATTTACTG
AGCGCAGAAA CCCGGGTGAA AACTGCGGAA AACCACGATT TCTCACGCTG GCTATCACAA
TGGTCCCCGT GGAAAAGCGT GGTGCAACGT ATTGAGCCTG AACGTTATGC TGCTGCGGTC
GAAAAGCAGT ACCACGCACT GGAAAATATT TACCCAGATA AACTGGCGGC TGAATTGGCC
GCCAACGGGA TGACGGGCGA TGTGGATGCC AACCGCATTG TCGGCAAAAG AATCAACGAT
GAGATAATGG AGGAGATCGA TATGGCCCTG ACTCATGAGG TTCTCTCTGC CAAAGGAGCC
TCCTCCTTAT TAGATAATCT GTGGATGGAA TCTCTAATCT CGTTTTAA
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| Protein sequence | MPNIGPDREI HADRAAATAL TPADYYAIWE KWENDPRTVA GEQRGQAVAR MKECLENNTE
RLDLDELGLT SLPDTLPPCN ELNIMANNLT ELPTTLPDNL QKLNVSFNQL RALPNTLPAS
LLSLNVFMNK LERLPESLPE GLKELDVNDN ESLQLPNRLP QNLESLGIVS CGLTELPTLP
NSLKRLDADS NQLRTLPETL PISLLRLSVT SNQLTQLPET LPASLSLLMV LGNRLTALPE
NLPGSLRCIS AEYNQLSQLP DLARLPQNCE ILLEGNPLST STLQVLQHLR TNPYYQGPRI
NCSELDNLPP ASLSNIVATW LPPEQQNRLA GDWANIETEA NSAAFSVFLH RLTTTQNANN
IPEFKQQIAA WLLQLADSPT LREQTFLIAQ EASATCEDRI TLTHNDMQKA VMLHEVEKGK
YDEKLPELMA RGREMFRLEQ LENIAREKVK ILKTLNVNSV DDIEVYLAYQ VKLLNSLQLS
SVNKEMRFFG VSHVTADDLL SAETRVKTAE NHDFSRWLSQ WSPWKSVVQR IEPERYAAAV
EKQYHALENI YPDKLAAELA ANGMTGDVDA NRIVGKRIND EIMEEIDMAL THEVLSAKGA
SSLLDNLWME SLISF
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