| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0695 |
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| Symbol | |
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| ID | 6090627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 755933 |
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| End bp | 758413 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641595756 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001719449 |
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| Protein GI | 170022944 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAA TTAAAAAAAT TCCTATAGCA ATGACTACAT CATTGATCAT GCTCAGTGGA
GCAGTCAGTG CTATTGATTT TAATACTGAT GCAATGGATG CTAACGACAA ACAGAATATT
GATCTTTCTC ATTTTACGAA CGTTGGCTAT ATCATGCCGG GTGAGTATCG GTTAGAGATC
AACGTCAATA ATCACCGTAT TCCCGAGCAG GTGATCGCTT TTTATGCCCG TGATGATGAA
CCGAATAGCA GTGAGGTGTG CCTACCGGAA GCGGTGGTGG AACAGTTTGG TCTGAAGCCT
GATGTGCTGC AAAAGATCAC ATTCTGGCAT GAGGGGCAAT GCGCAGATTT GCGTGAGCTG
GCGGGATTAA CCACGGAGGT TGATTTAGCG ACCAGCACGT TAGCTATCAA TGTTCCGCAA
GACTGGATGG AATACAGTGA CAGCAATTGG GTGCCGTCTT CTCAATGGGA TGAGGGGATC
TCTGGGTTTC TGTTGGATTA CAACGTGAAC TCGCTGTTTA GTAAGCCGAA AGAGAGTGGT
TCCACCCGGA ATATCAGCCT CAACGGTACG TCGGGTCTGA ATGCGGGCCC TTGGCGGTTA
CGGGGCGATT ATCAAGGGAA CTACAGCCAC AGCAGTGGCG AGCAGAATTC GTCTACCAGT
ACATTTGACT GGAGCCGGAT CTATATGTAT CGGGCGATCA AGTCACTGGC AGCTACCTTG
AGCGTTGGTG AAAACTATTT CGCCTCCAGC CTTTTCGATA CGTTCCGTTA TGCCGGAGCC
AGTTTGTCCA GCGATGAACG TATGTTGCCA CCTAATTTAC GCGGTTATGC CCCTGAGGTT
AGCGGGATAG CCAGAACCAA CGCCAAAGTG ACGGTCTCCC AGCAGGGGCG CATACTGTAT
CAAACCACGG TGGCCTCCGG TCCTTTTCGT ATTCAGGAAC TGAGTGATTC TGTTTCCGGG
CGGCTGGATG TCAGCGTGGA GGAGCAGGAT GGCACGGTAC AAACTTTTCA GGTGGAGACG
GCTGCGGTTC CCTATCTGAC CCGCCCTGGT GCAATCCGCT ATAAAACGTC GGTGGGCCAG
CCCTCAACGC TGAATCATGG GACGGAAGGC CCGGTCTTTG CCAGTGGCGA ATTCTCTTGG
GGGGTCAGTA ATCGCTGGTC ACTGTTTGGC GGGGCCATTG GCTCGGGTGA TTACAATGCC
GTGTCGGTTG GGGTTGGCCG TGATTTATAT GCATTTGGCG CCATTTCAAC GGATATCACC
CAAACCCGTG CATCGGGCCT TCCCAACCAA GAGACGCAGA GCGGGAAATC GTTGCGCGTC
AGGTATGCCA AGCGCTTTGA TGAACTGAAC AGTGATATCT CGCTGGCGGG GAACCGTTTT
TTTGAACGTG AATTCATGTC GATGAATCAG TATCTCGGCA CCCGTTATTT CGATAATGAC
CTTGGGCGCA ACAAGGAAAT GTATACGGTG ACGGCGAGTA AAAATTTTCC TGATATCCAG
ACCAATATCA ATTTTTCATA CAGTTACCAG AATTATTGGG ATCAGCCCAC GTCCAACAGC
TACAGCGCGA CGGTCAGCCA CGCTTTTGAT GCTTTTTCTC TCAAAGATAT GACGGTCAAC
CTTTCTGCCA GCCGTAGCAA AAATAACGGC GTGAATGATG ATGTGCTGTA TCTGAGTTTT
TCGGTGCCAT TAGGCAATCA ACAAACCCTC AGCTACAGCG GGCAACATAA TGGTCAAGGG
AACAACCAGA CCGTGAATTA TTCTAACAGC TCGGCTATCG ATAGCAGCTA CCGGTTATCC
GCAGGGGTTA ACAACAGCAA TGATAATGGT GCGCGCGGCC AGTTCAGCGG TTTTTATATT
CATCGCAGCA GCATTGCTGA AACCAGCCTT AATGTCGCTT ATGCGCAGGA TGATTTTACC
TCGACCGGGG TTTCTATGCG CGGGGGCGCG ACGGTTACTG CGAAAGGTGC GGCATTACAC
GGCCCCGGTA TGAGTGGCGG CACCCGCCTG ATGGTCAATA CCGATGATAT TGCTGGCGTC
CCACTGGAAG AGCGGAATAT TCGTTCAAAC CGTTTTGGTA TTGCTGTGCT GAATAATATT
AACAGCTACT ACCGTACAGA TACGCGTATC GATATCAATC AGTTGGCTGA TGATGTTGAA
GTTAAGCAGT CTGCGGTGGA GTTCGCCCTG ACCGAAGGGG CTATTGGTTA TCGCCGTTTC
GCCATGATGA AAGGGGAGAA GGTACTGGCA ACCATCAGCC TGACCGACAG TAGCCATCCG
CCTTTTGGTA GTTTGGTCAT CAGTGCCAAA GGGCAGGAAC TGGGGATCGT TAGCGATGAC
GGTTTTACTT ACCTGAGTGG AGTGGAGCCA GGAGAAACAC TGGATGTCGT TTGGAGTGGT
GCTAAGCAGT GCCAGGTGGC GATCCCAGCA GTAATACAGC CGCAGGCGCA AATATTATTA
CCCTGCATAT CCGTTAACTA A
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| Protein sequence | MRIIKKIPIA MTTSLIMLSG AVSAIDFNTD AMDANDKQNI DLSHFTNVGY IMPGEYRLEI
NVNNHRIPEQ VIAFYARDDE PNSSEVCLPE AVVEQFGLKP DVLQKITFWH EGQCADLREL
AGLTTEVDLA TSTLAINVPQ DWMEYSDSNW VPSSQWDEGI SGFLLDYNVN SLFSKPKESG
STRNISLNGT SGLNAGPWRL RGDYQGNYSH SSGEQNSSTS TFDWSRIYMY RAIKSLAATL
SVGENYFASS LFDTFRYAGA SLSSDERMLP PNLRGYAPEV SGIARTNAKV TVSQQGRILY
QTTVASGPFR IQELSDSVSG RLDVSVEEQD GTVQTFQVET AAVPYLTRPG AIRYKTSVGQ
PSTLNHGTEG PVFASGEFSW GVSNRWSLFG GAIGSGDYNA VSVGVGRDLY AFGAISTDIT
QTRASGLPNQ ETQSGKSLRV RYAKRFDELN SDISLAGNRF FEREFMSMNQ YLGTRYFDND
LGRNKEMYTV TASKNFPDIQ TNINFSYSYQ NYWDQPTSNS YSATVSHAFD AFSLKDMTVN
LSASRSKNNG VNDDVLYLSF SVPLGNQQTL SYSGQHNGQG NNQTVNYSNS SAIDSSYRLS
AGVNNSNDNG ARGQFSGFYI HRSSIAETSL NVAYAQDDFT STGVSMRGGA TVTAKGAALH
GPGMSGGTRL MVNTDDIAGV PLEERNIRSN RFGIAVLNNI NSYYRTDTRI DINQLADDVE
VKQSAVEFAL TEGAIGYRRF AMMKGEKVLA TISLTDSSHP PFGSLVISAK GQELGIVSDD
GFTYLSGVEP GETLDVVWSG AKQCQVAIPA VIQPQAQILL PCISVN
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