Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0679 |
Symbol | |
ID | 6090525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 740637 |
End bp | 741407 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641595740 |
Product | putative lipoprotein |
Protein accession | YP_001719433 |
Protein GI | 170022928 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.185278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAA TATTTAATAC TATTATTATC ATCCCAGTGA TGCTTTTTCT GTTAAGCGGT TGTTTGAGCC AACAGGGTTT AAGCTCACAA GGTTTAAGCA CAAAAGAATT TTCTTATCGT GAAAGTATTT TAATTAAAGC CAATAATCAA ATTGGTTTGA TTAAACTTTA TCGCGAATCA CTAAAAAACA AAGAAGACGA ATCAATCAGA TTGAAATTAG CGAATGCCTA TTACCTCTCC GGTGATAGCC ATTCTTCTTT ATATTATCTG CAACCTATCT CCCATAAACC TAACGTATCT ATCTATCTTT TACAGATAAA AAACTTAATT AACGAGGGTG ATAATTCGGG TGCGACTACA GTACTGCACC GGTTATTATC TATTGCCCCC CATAATCCTG AAGCACATAA CCTAAAAGGT ATTATTCTGG CTAACCGTGG TGATACAGCA GGGGCGCGTA CCGCTATTGT TCAATCGCAA GCTCTGTTTA TCCAAGAGGA TATTGCAAGA AATAATATTG CAGTCATTTC AATGTTGGAC AACCGCTATG AAGACGCAGT AAAGATATTA CTACCAGACT ATCTTTCCGG TAAAAGAAAC AATTTAATAT TACATAATCT GGTATTTGCA TTGATTAAAA TGGGTGACAC TCGCTACGCA AAGAACATTA TTGAAGCAGA GCGGTTATCT GATAATGCTG ACGAGTTAGT ATTAGCGCTG AGTCAGGTTG ATTCATTCCC TCAGAAACAA TCCGTCATTA GGGAAAAATG A
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Protein sequence | MLKIFNTIII IPVMLFLLSG CLSQQGLSSQ GLSTKEFSYR ESILIKANNQ IGLIKLYRES LKNKEDESIR LKLANAYYLS GDSHSSLYYL QPISHKPNVS IYLLQIKNLI NEGDNSGATT VLHRLLSIAP HNPEAHNLKG IILANRGDTA GARTAIVQSQ ALFIQEDIAR NNIAVISMLD NRYEDAVKIL LPDYLSGKRN NLILHNLVFA LIKMGDTRYA KNIIEAERLS DNADELVLAL SQVDSFPQKQ SVIREK
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