Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0583 |
Symbol | |
ID | 6091328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 641999 |
End bp | 644284 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641595645 |
Product | outer membrane autotransporter |
Protein accession | YP_001719339 |
Protein GI | 170022834 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.490973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACC ATAAGATCTG GCGTTTATCC GCCGTTGCTG TTGCTTTACT GATTAGCGGT AATGGCTATG CCGATCAGAC CTTCCACTTC GCTCAGCAAC CGCATAACAC GGGCGATCAT ACTGTGATCG CCGCACCAGA GGTCAATAAC TTTTCATTGG CAGATCTGAC CGCCAACGCA GAAGGGCAAG CAGTGGATGC GACCAACGCA GGCGCACTGT CGCTGCGGGT TGAACCCACT CAAGGTGACG CTCAGGCGAA TGGCGTACTG GTCACCTCCG GCACCTTTAC TAATCAGGCT CAGGGCTCGA TCACCGTGAG TGCCAGCAGT CAGGATCAAC ATGCTGTTGC CAGCGGGTTG CAGGCAACGG ATGCCTATTG GTCCACTCTG CGTAATCAGG GTAGCATCCG TGCCACGAGC AACAGCCTAC ACGGCAGTGC CGAGGCCTAT GGTATCCAGG CTGGCCTGGC CTTTTCCGAT GCCGCCGGGG ATCACTACGG TGACCACATG ATGTTGAGCA ACGAGGGGGT GATGCAGGTG AGTGCCACGG CCGAGCAGGA CGCCTTTGCC AGCGGTATCT ATACCAATGC CGGTAATGGC GTGGTCAACA ATGGGCGTCT GGATGTCAGT GCTCATGCCA GTGCTGGCGA TGCGCGGGCA ACCGGCCTGC ATACCCTCTC TGCCAACCCA GGCGTCGATC CCGATCCATG GAACCCCGCT AACCCCACTC ATCTGATGAG CAACAATGGC TCGTTGTCAG TCACGGCCAG CGGTAACAAT GCGACCGCAA GCGCGATCAG TACCGAGGGC GAAGGGGTCT ACATCTACAA CAACGGGACA CTGATCGTTG ATGCATTTAG CGAGAGTGCG CAGGGCAGTG CATCCGCCTA TGGTATTCAT GTGCTCAACG GCAGTGCCAC GATCAACTCC AGCGGCAGAA TTTTGGCGAC AGCCACCGGC GGAAGCCAAC AGCAAGCCTA TGAAGTGATG GCTGACGGTT CGGTAGTTAA TATTGAACGC TATACACTCG CCTTGGGCGA TGAGACACCG TGGGCGGTCA GTAATGGCGG TTCGATCGTG CTGGGTAACG GTACGCAAGG GGCCGATCTG GTGCTAATGG CTGGGCAGGC CAGTGAAGGT TTCGCCTATG GTAAAGAGTA CAGCTTGGAC AATCTGGCTT ACGATACCAC CTCCGGCCAG CAGAGTACGG TGGGGGGTTC TATTGCGGGG TTGTACGGTA TTACGCCTGA TATCAAGGTG ATTCACAGCG GTAGCAGCAG TAGTTCGTTG GGATCTGCTG CACTGGTGTA TGCACCGGAT GTCTCTCATG CCGGAGTCTC CGCATTGGCA CAGCGTTCTT CCATGGAGCA GGCATCCAAT ATTATCTCCT CGCAACTGCA TAGTCAGTTG GTAAGTAACG CCGGTTGTAA CCAGAAGTTG GAGAGTGCCG ATAGCTGCGT CTTTATCACA CCTTATGCTG GTGAGTACCG TCGTGATCCA GTGACCTCCG GTTACAGCGG TCAGCGCTAT GGGGTATTGC TCGGTCAGAA CCAACATTTT GGCGATTTCC AGCTTGGCTG GCACGGCGGT TATGAGAGTG CCAGCACCGA TTTTAATGGT ACCTCTGTAG GGCGTAAGGA AGAGATCAAT ACGCTGATGC TGGGGGTTCA GGGCGGAATG AAGCTCTCTG AGAGTCTGTT TATTGCAGCG ACCAGTACGT GGTTCAGCAG TGACACCGAT TACAGTGACA GCAATACCTA CTACGGCGTG GGTAGCCAGA GCGGCAGCTA TGATAGCAGC GGCCTCTACA CCGATGTCTC CGTGGGTAAT AGCTGGCAGT TGAATCGCAA CTATGCCATG ACGCCGATGG TCGGGCTGAC GCATATCTGG CAGCAACGCG ATGGCTATAT TGTCTCATCC AATAACAGCA ACTATGATCT TATCGACACC CGCTATAGCA GCTACAGCAA CCATGCAGTC GCTCTCCATG CTGGAGTACG TCTCGATGGT CGCTATCCAC TGACCAACGA GACACTGCTA AAGCCGTTCT TTAATGTCGG ATTGCAGCAA ATGTTGTATG GCGATGAGAT CACCATCGAT CAGAGTATCC CTAATTCGCC GGTAGTTGGC GTAAGCACCA AGGATAAAAC CACTCAAGGA ACCTTCGATC TGGGGATGGC ACTGGTAAGC GATAACGGTG TGTCTGCCAG CCTACAGCTA TCGGGCATGG TCAATAGTGA TCGTCAGGAT TTCACCGGCT GGGCAAATCT GGGCTGGGCG TTCTAG
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Protein sequence | MNNHKIWRLS AVAVALLISG NGYADQTFHF AQQPHNTGDH TVIAAPEVNN FSLADLTANA EGQAVDATNA GALSLRVEPT QGDAQANGVL VTSGTFTNQA QGSITVSASS QDQHAVASGL QATDAYWSTL RNQGSIRATS NSLHGSAEAY GIQAGLAFSD AAGDHYGDHM MLSNEGVMQV SATAEQDAFA SGIYTNAGNG VVNNGRLDVS AHASAGDARA TGLHTLSANP GVDPDPWNPA NPTHLMSNNG SLSVTASGNN ATASAISTEG EGVYIYNNGT LIVDAFSESA QGSASAYGIH VLNGSATINS SGRILATATG GSQQQAYEVM ADGSVVNIER YTLALGDETP WAVSNGGSIV LGNGTQGADL VLMAGQASEG FAYGKEYSLD NLAYDTTSGQ QSTVGGSIAG LYGITPDIKV IHSGSSSSSL GSAALVYAPD VSHAGVSALA QRSSMEQASN IISSQLHSQL VSNAGCNQKL ESADSCVFIT PYAGEYRRDP VTSGYSGQRY GVLLGQNQHF GDFQLGWHGG YESASTDFNG TSVGRKEEIN TLMLGVQGGM KLSESLFIAA TSTWFSSDTD YSDSNTYYGV GSQSGSYDSS GLYTDVSVGN SWQLNRNYAM TPMVGLTHIW QQRDGYIVSS NNSNYDLIDT RYSSYSNHAV ALHAGVRLDG RYPLTNETLL KPFFNVGLQQ MLYGDEITID QSIPNSPVVG VSTKDKTTQG TFDLGMALVS DNGVSASLQL SGMVNSDRQD FTGWANLGWA F
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