Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0570 |
Symbol | |
ID | 6087137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 627980 |
End bp | 628618 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641595632 |
Product | von Willebrand factor type A |
Protein accession | YP_001719326 |
Protein GI | 170022821 |
COG category | [R] General function prediction only |
COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGAC TACCGGTTTA CCTGTTGCTT GATACCTCGG GATCCATGAC AGGCGAGCCT ATTGAGGCGG TCAAGAATGG GGTTCAAATG CTGTTGTCCA CGCTAAGACA AGATCCTTAT GCCCTTGAAA CCGCCTATGT GTCCGTTATT ACCTTTGATT CCTCTGCCCG TCAGGCTGTT CCACTGACTG ACCTTTTGAA TTTCAAATTG CCTGAGCTGG TGGCAAATGG CACCACCGCA CTGGGTGACG CACTGTCGCT CACCGCAAAA TGTATTGGCA ATGAAGTTCA AAAAACGACC GCGGATACCA AAGGTGACTG GCGGCCACTG GTCTTTATCA TGACGGATGG CTCGCCGACA GATGATTGGC GTAAAGGCCT CAGCGATTTT AAAGCCGCAA GAACGGGCGT TGTAGTTGCC TGTGCGGCAG GACATGCGGT GGAAACCAAG GTCTTACAGG AAATCACTGA AATTGTTCTT CAGTTAGATA CCGCAGACTC CAGTTCAATT AAAGCCTTCT TTAAATGGGT ATCGGCCAGT ATCTCCGTGG GAAGCCAGAA AGTTGAGTCA GGTAAAAAAG AGGTTATTGG CCTTGATGAT TTACCACCAC CACCACCGGA AGTGAATGTT GTCTTATAA
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Protein sequence | MRRLPVYLLL DTSGSMTGEP IEAVKNGVQM LLSTLRQDPY ALETAYVSVI TFDSSARQAV PLTDLLNFKL PELVANGTTA LGDALSLTAK CIGNEVQKTT ADTKGDWRPL VFIMTDGSPT DDWRKGLSDF KAARTGVVVA CAAGHAVETK VLQEITEIVL QLDTADSSSI KAFFKWVSAS ISVGSQKVES GKKEVIGLDD LPPPPPEVNV VL
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