Gene YPK_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0480 
Symbol 
ID6087201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp530809 
End bp533310 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content39% 
IMG OID641595542 
Productvirulence protein 
Protein accessionYP_001719236 
Protein GI170022731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATA ATATCGACCA TACTGCATCC GTTATCACGG ATACTGATAA TACGATTCAT 
CAGCAAGCCA AAGCAGAAGA GCGCCACCGC CAGGCCGTCA GGCGGGCAAC ACAGCTACGC
AACGATCCGG TACTCAGTGG CATCAATAAA CTGGCCTTTT CTGTTGCACC AAAAATATTG
CAGCCTGAAG CCAGAACAGA TCTTTCACTG GCCGAAGGAA TACCAGAACG AGCAAATGAG
TATGCCGATC CGGCATCTAT CCAATCCTTG TTCTCTCCGG GCCGCTATTT ATGCGAATTG
TATCATGTAG CAAAAGAGCT ACATGAAGAT GGAAACAAAC TGCATATCGA TCAACGCCGC
CCTGATTTAC AAGATCTGGT GCTTAATAAC AGTAATATGA ATCAAGAAGT CTCTTCGCTG
GAGATCTTAC TCAATGTACT GCAAACGAAG GCGCCTCTGG ATGAGCTGAC TAAAGATACC
GAAGCACACG TAAATGACGT TTCTTTTACC CTGCCTTATG ACGATAACCT AACGGTTATT
AATGCGGTGC TACAGGATAA ATCAACTAGT CTGCGAGAAA TTGCAGCCCT GTTAGCGGAG
AATAATGATC CATGGGCTAA TCCCATTACC CCCGCGTTAG TACAAGAACA ACTGGGATTG
AATCCGGCCA GTTATGAATT AATTGATATA AAATCCCCAT TGGATGAGAG TTACGCCAAA
CGCCTGGCAC ATGCCACGCA ACTCAGTGTT GAACAACTGC AATGGCTTAA TAAAAATGCC
ATTGAAAATA GCAGCAATAA AAATGATCCA GCCAAACTCG AAATACTCGC AGTCATCTCC
GAATATCGCC GTTTACATCA GCGTTACGGC CTGTCTGTCG ATCCGTTTAT CGCCATTATT
AATGCCGTTA ACACCACCCA TACCAACGAA AATAAAACCA GTTTCTTCCA GCAGATTTTC
TCTACCCTTG ATGTAGATGC AGGATTTAAC TTCCTTGATC AGGGTTCGTG GGAAGTGATT
ATCCGCAAGG CATTGGGCAT TACTGCCGAA GAACTGTTAC GTATTGCGAA ATATTGCTTT
GGTAAGAGTT CAATTAGCAA CGTAAAGATG AATAGTAAAA AATTCAGCCA ATTATACCGT
ATGGCAATGA TCCCCCGCAC ACTTGGTGTG AGTTTCTCGC AAGCTGAATA TCTATGGCAG
TTATATAGCC ATCCAGATGA AAATATTATG GAAAAAATAG CCCAGGGTAA TGCTCTGACC
ATTATTGATG CCATTATTGT GCTAGAAAAT ACCCTTCAAT GGATGAGTGA GCAAAAACTG
GATATCACCA CCCTACAAGC CATGCTCACC AAGCAATACA GCACCACAGC GACCCCTGAA
TTATTTAATT TCTTATCCAA TATTTATCAA ACCTTAGGTA AGCAAGTTTA TTCCGAATCG
CTCAAACCTA ATCTGTATCG CAGCTTGGCA AACGGCTTCC ACCTAAAAGC TAATGTAGTC
GCAGGGCTGG TCAATTGGTT AGCAAAAAAT GACTCTGAAT TTACCTTAGA AAGATTTTGG
CAAAATATTT CCATGACCTT TGCTGAAGAG CCTTCATTGC ACCAATTGGA AGTCCATCAG
CCCTTGATTC TCCAATGCCA AAAACTGAGC CAATATGTAT TAATTGCGCA ATGGGCAATG
TTGTCTGAAC AAGAGATAGC ATTAATTTTA TTACCCAATG GCATTGATAA TAGAGGTCGT
GCCCCTTCTC CAAGTATCAC GCTGTTAAAG TTATTATCTG AATTTAAGTT ATGGCAACAA
GAGGCTGAGG TGTCGCAAAG CGAATTATTC GACATTATGC AACAGCTGAT TACTGGTACA
AATGAAAAAC AAGAAAACTT AAGAAATGCA GCCGAAAAAG TACTAAGATC AATAGCAAAA
AATATTGGTG ATATAGATAG CGATATAGAT AGAGCTGATT CTACCATAAA TATTAGAAAT
GGTAGCGCAA CACTGTTCCC CCCAGAACAC CCCATGTATA AAGCACTTAA ACTTGAAGTA
TCAAACCTTG AAAAATCAAA AATTCAGTTA GAAGGTAAAA AGAAAGAAGA GGAGATAAAA
CTAGAACAGG CCAAAGACAA TATACAGTCA CTAATTAATA ATTGGGACAG TGAAATAATC
ATACGTTTGG CAGACGCATA CCATTGGGAT ATAAACATTG CTAATAGTAT GTTTATACTT
ATTTTTGGCG AAAAGATAAA CTTCACTTTC CATTATGAGA ATAGAAATGA TTATCATTAT
GAAGAACACT ATGGTTATCG TTTTGAACAA AAACCAATGT ATAGTTTTGA TAAAAAATTG
ACTAATGGGT TTGGATCAAT CTTATTATTG AAAAATCACA TTTATATCGC TGAAAAATTA
AAAATCCATC CTGGAACCAT AATTAAAATA AAAAACTATA TTTTTGATGA TAAGAGTAAC
GAGTTAGAGA ATATCGCCAA CAAGCTAAGA GTTAATCTTT AA
 
Protein sequence
MQDNIDHTAS VITDTDNTIH QQAKAEERHR QAVRRATQLR NDPVLSGINK LAFSVAPKIL 
QPEARTDLSL AEGIPERANE YADPASIQSL FSPGRYLCEL YHVAKELHED GNKLHIDQRR
PDLQDLVLNN SNMNQEVSSL EILLNVLQTK APLDELTKDT EAHVNDVSFT LPYDDNLTVI
NAVLQDKSTS LREIAALLAE NNDPWANPIT PALVQEQLGL NPASYELIDI KSPLDESYAK
RLAHATQLSV EQLQWLNKNA IENSSNKNDP AKLEILAVIS EYRRLHQRYG LSVDPFIAII
NAVNTTHTNE NKTSFFQQIF STLDVDAGFN FLDQGSWEVI IRKALGITAE ELLRIAKYCF
GKSSISNVKM NSKKFSQLYR MAMIPRTLGV SFSQAEYLWQ LYSHPDENIM EKIAQGNALT
IIDAIIVLEN TLQWMSEQKL DITTLQAMLT KQYSTTATPE LFNFLSNIYQ TLGKQVYSES
LKPNLYRSLA NGFHLKANVV AGLVNWLAKN DSEFTLERFW QNISMTFAEE PSLHQLEVHQ
PLILQCQKLS QYVLIAQWAM LSEQEIALIL LPNGIDNRGR APSPSITLLK LLSEFKLWQQ
EAEVSQSELF DIMQQLITGT NEKQENLRNA AEKVLRSIAK NIGDIDSDID RADSTINIRN
GSATLFPPEH PMYKALKLEV SNLEKSKIQL EGKKKEEEIK LEQAKDNIQS LINNWDSEII
IRLADAYHWD INIANSMFIL IFGEKINFTF HYENRNDYHY EEHYGYRFEQ KPMYSFDKKL
TNGFGSILLL KNHIYIAEKL KIHPGTIIKI KNYIFDDKSN ELENIANKLR VNL