Gene YPK_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0436 
Symbol 
ID6090130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp479381 
End bp479986 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content51% 
IMG OID641595498 
Productsugar isomerase (SIS) 
Protein accessionYP_001719192 
Protein GI170022687 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA ATAAGGAGTG GCTGGCGGCC AGTGATGCCT GGATGATCTA CAGCCGCGAA 
CTGGCGGCAT TAAAAGAGAA TGTCGATCAA CAGGTGTGGT TGCAGGTACT GGATGCCTTG 
GCTGAATGCC GTGGAAAAAT TGCGGTGACG GGGGTGGGGA CATCGGGTAT TGCGGCCCGT 
AAAGTGGCGC ATATGCTAGC TTGTGTTGAG CAACCGGCGA TTTACCTGAA TGCAACTGAT 
GCGGCACACG GTGATCTGGG GTTTCTCGGC GCGCAGGACA TCATTATTTT GATTTCCCGT 
GGCGGTAATT CTGATGAGTT AACCCGTTTG CTGCCCACCT TGCAACGTAA GCAAGTGAAG 
ATTATCAGCG TGACAGAAAA TGAACAGTCT GCAATTGCGC AGGTCTCCGC GTTGGTGCTG 
AAGACACATG TAAAGCAGGA GATCGATCCG CTGAATATGT TAGCGACAAC ATCGATTGTT 
TTAGTACTGG CGCTGTTTGA TGCTATCTGT GCCTGTCTAA TGGCGCGTAC TGGTTTTAGT 
AAAGAGACTT TATTGGCGGT TCATCCCGGT GGAGATGTCG GGATGGCGTT ACGTAAGCAG 
CAATAA
 
Protein sequence
MSQNKEWLAA SDAWMIYSRE LAALKENVDQ QVWLQVLDAL AECRGKIAVT GVGTSGIAAR 
KVAHMLACVE QPAIYLNATD AAHGDLGFLG AQDIIILISR GGNSDELTRL LPTLQRKQVK 
IISVTENEQS AIAQVSALVL KTHVKQEIDP LNMLATTSIV LVLALFDAIC ACLMARTGFS 
KETLLAVHPG GDVGMALRKQ Q