Gene YPK_0369 details

Gene Information

• Locus tag: YPK_0369
• ID: 6090339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 401575
• End bp: 402360
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641595435
• Product: hemolysin
• Protein accession: YP_001719129
• Protein GI: 170022624

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.819842
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAGGCG CAGTACTCCA GGCTAACCAG ATTAGTGGGC AAATCGGTGG GGATCTAAAC 
GTCATTAGCC GCGAAAACAG ACTCAATAAA GTCAATGTTT CTGCCGCACT TGGCGGCAGC 
CACAGCAATG CAAAACAAGA CAGTTTGATC AGCCAGGTAG CGAATGCCAG CCCAATTATG 
TCTGATAAAA TCAAGAATAA ACTGGAAGAG AAATCTACCA AGATCTTCGA CAAAGTCGAA 
AATAAATTCA ACACCTTAGG AAAAGAAAAG GACGATAGCG TCCAGACCAT CAGCTATACC 
AAAGACGGTC AAACAGTGAA GATCAGCGAA GCCGATGAGA AGAAGGAAAC CAAAGATAAA 
TGGTGGCAGA AAGGGGCTAA ATCTGTCGGT AAGAAAATCA AAAGCGCGGT ACAGGATGAA 
CAAGTCGTCG GGGGTAACGG CAGCGTCAAA GCGAACGTAG AGGTTGTCGA GAGCCAAGGG 
GTTGAGGAGC AATCAGCTAT CCGGGGTACA CAGAATGTGG ATCTGACCGT TAAGGGTAAA 
ACTGACCTGG TTGGCGGGAA AATATCCAGT AAAAATTCGG ATGTTAAGCT AAAAACCAAT 
GGGTTAGAGA CGCAGGATAT CAACGGGAAA TATACCGAAG GGGGTGCACG ATTGAACGCT 
TCTTCATCGG TTATGGATAT GATTAGCGAT GGCGCTAAGG ATGTAATGGA TGGCAAGGCA 
CCGCTGGTCA GTGGACATGG TAAATCTGAA CAGAAAAATG CAACGGGTGG TATCACCAGA 
GAATGA 

 

Protein sequence

MAGAVLQANQ ISGQIGGDLN VISRENRLNK VNVSAALGGS HSNAKQDSLI SQVANASPIM 
SDKIKNKLEE KSTKIFDKVE NKFNTLGKEK DDSVQTISYT KDGQTVKISE ADEKKETKDK 
WWQKGAKSVG KKIKSAVQDE QVVGGNGSVK ANVEVVESQG VEEQSAIRGT QNVDLTVKGK 
TDLVGGKISS KNSDVKLKTN GLETQDINGK YTEGGARLNA SSSVMDMISD GAKDVMDGKA 
PLVSGHGKSE QKNATGGITR E