Gene YPK_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0306 
Symbol 
ID6090982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp330539 
End bp330928 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content50% 
IMG OID641595366 
Product30S ribosomal protein S11 
Protein accessionYP_001719072 
Protein GI170022567 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000963543 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGG CACCTATTCG TGCACGTAAG CGTGTAAGAA AGACAGTCTC TGACGGTGTG 
GCTCATATCC ATGCTTCTTT CAACAACACC ATCGTTACCA TTACTGATCG TCAGGGTAAC
GCATTGGGTT GGGCAACAGC AGGTGGTTCC GGTTTCCGTG GTTCTCGTAA GTCTACTCCG
TTTGCAGCGC AAGTTGCAGC AGAGCGCTGC GCTGAAGCAG TGAAAGAATA CGGTATCAAG
AATCTGGAAG TTATGGTTAA AGGACCTGGT CCGGGCCGTG AGTCTACTAT CCGTGCGTTA
AACGCGGCTG GTTTTCGCAT CACTAATATT ACTGATGTGA CTCCGATCCC TCATAACGGT
TGTCGTCCGC CGAAAAAGCG CCGCGTATAA
 
Protein sequence
MAKAPIRARK RVRKTVSDGV AHIHASFNNT IVTITDRQGN ALGWATAGGS GFRGSRKSTP 
FAAQVAAERC AEAVKEYGIK NLEVMVKGPG PGRESTIRAL NAAGFRITNI TDVTPIPHNG
CRPPKKRRV