| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0221 |
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| Symbol | |
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| ID | 6089926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 259958 |
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| End bp | 260563 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641595281 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001718987 |
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| Protein GI | 170022482 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.632717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAGG TGAATTTCTT GCCGTGGCGT ATTGCCCGGC AACAGGCTCG CTACCGGTTC
TGGCGCAATA CCATGCTGAT CCAAGGTATT GGCTTGGCTC TCTATCTGGT GGTGGTGCTA
ATGCAGGCCC GCAGTGAACA CAAACACCGG CAAGGCACGG CGGCGGCATT ATCACAGCAG
CAGGCTGCAT TAAGCCAACG TCAACAGCAA GTGCAGCAGG CAATGGCGCA GTTGCAGCGG
ATAAAACAGC ATATTCAGCG CTACCATCAG GCTCATCAAC CTGCCCGAGG TTACTCCATA
TTATTGCAAC AGCTATCACA GCAGATCCCT GAACGTTGCT GGCTGATGGC CCTAAGGCAG
CAAGGTGATG TGCTGTCTTT CGAGGTTATT AGCCGGGATT ACGCCACAAT TAATGCATTT
TTAGCGATGT TAGGCCGTCA GCCTCTTTTG GTTAATGTGA GCTTGCAGGG GATTACTCAA
CAGGATGAGG GCGGTTTTCG TTTCGTGGTG CATGCCTCTT GGCGGGACGA AAACCATCAT
GTAGAAGGCC ATCATGCAGA AGGCCATGAT ATCGACGGTC ATCATGTGGC AGGGGACTAT
GAATAA
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| Protein sequence | MYQVNFLPWR IARQQARYRF WRNTMLIQGI GLALYLVVVL MQARSEHKHR QGTAAALSQQ
QAALSQRQQQ VQQAMAQLQR IKQHIQRYHQ AHQPARGYSI LLQQLSQQIP ERCWLMALRQ
QGDVLSFEVI SRDYATINAF LAMLGRQPLL VNVSLQGITQ QDEGGFRFVV HASWRDENHH
VEGHHAEGHD IDGHHVAGDY E
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