Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0135 |
Symbol | |
ID | 6091356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 162155 |
End bp | 163471 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595195 |
Product | gluconate transporter |
Protein accession | YP_001718901 |
Protein GI | 170022396 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTAA TCATCGTCGC GGTTGGCGTT GCCATGCTGC TATTACTGAT GATCCGTTAC AAACTTAACG GATTTATCTC GCTGATACTG GTCGCGTTAG CGGTAGGTAT CATGCAAGGG ATGCCAATCG ATAAAGTTGT CGGCTCGATC AAAGCGGGTG TCGGCGGAAC ATTAGGTAGC CTGGCCTTGA TTATGGGCTT CGGGGCCATG CTCGGTAAAT TGCTGGCCGA TTGTGGCGGC GCTCAACGTA TCGCGACCAC CTTAATTGAG AAGTTTGGTC AAAAACATAT TCAATGGGCG GTGGTACTGA CCGGCTTTAC TGTGGGTTTT GCCCTGTTTT ATGAAGTGGG TTTTGTGCTG TTATTGCCGC TGGTATTCAG CATTGCGGCC TCTGCCCGCA TCCCCTTGCT ATATGTGGGT GTTCCCATGG CTGCGGCGCT TTCTGTCACT CATGGTTTTC TGCCACCTCA CCCAGGCCCG ACCGCCATTG CCACCATTTT CAGCGCCGAT ATGGGCAAAA CGCTGCTGTA CGGCACATTG CTGGCAATCC CAACCGTGAT TTTGGCAGGC CCGGTCTACG CTCGCTTTCT AAAAGGAATT GATAAGCCTG TTCCTGAAGG GCTGTATAAC CCGAAAATCT TTACCGATAA AGAGATGCCA AGCTTTGGGG TCAGTGTCAG TACGGCGCTG GTACCGGTTA TTTTGATGGC ATTGCGGGCC GTAGCAGAGA TGATTTTGCC TAAAGGCCAC TCGCTGCTCC CCTATGCCGA GTTCTTTGGT GATCCAGTAA TTGCTACGCT GATTGCCGTG TTAATTGCAA TTTTCACCTT TGGTCTAAAC CGGGGCCGCT CAGTGGAATC GGTCATGGAG ACCCTGTCTG ATTCCATCAA GATCATCGCA ATGATGCTGT TAGTTATTGG AGGCGGCGGT GCTTTCAAGC AGGTTTTAGT CGATAGCGGC ATAGAGCAAT ATATTGCTGG CATGATGGGC AATAGCGGGG CATCGCCTAT TCTGATGGCA TGGTCCATCG CCGCCTTACT GCGTATCGCC CTGGGTTCTG CGACGGTAGC AGCGATCACC GCTGGGGGCA TTGTCGCACC GTTAATCGCG ACCACCGGTG CCAGCCCTGA GTTGATGGTC ATTGCCGTTG GTTCCGGTAG CGTGATCTTC TCTCACGTGA ATGACCCTGG TTTCTGGCTA TTCAAGGAGT ATTTCAACCT AACCATTATG GAAACCATTA AATCGTGGTC AGTACTGGAA ACCATTATTT CAGTCTGCGG GTTGATCGGC TGTTTGTTGC TGTCTCTGGT TATTTAG
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Protein sequence | MPLIIVAVGV AMLLLLMIRY KLNGFISLIL VALAVGIMQG MPIDKVVGSI KAGVGGTLGS LALIMGFGAM LGKLLADCGG AQRIATTLIE KFGQKHIQWA VVLTGFTVGF ALFYEVGFVL LLPLVFSIAA SARIPLLYVG VPMAAALSVT HGFLPPHPGP TAIATIFSAD MGKTLLYGTL LAIPTVILAG PVYARFLKGI DKPVPEGLYN PKIFTDKEMP SFGVSVSTAL VPVILMALRA VAEMILPKGH SLLPYAEFFG DPVIATLIAV LIAIFTFGLN RGRSVESVME TLSDSIKIIA MMLLVIGGGG AFKQVLVDSG IEQYIAGMMG NSGASPILMA WSIAALLRIA LGSATVAAIT AGGIVAPLIA TTGASPELMV IAVGSGSVIF SHVNDPGFWL FKEYFNLTIM ETIKSWSVLE TIISVCGLIG CLLLSLVI
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