Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0134 |
Symbol | |
ID | 6091313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 161125 |
End bp | 162063 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641595194 |
Product | LacI family transcription regulator |
Protein accession | YP_001718900 |
Protein GI | 170022395 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTCA GCCGTTATTT GCGGAATCCA GAACAGGTTT CTGCTGTTTT ACAGGAAAAA ATCGCGCTGG CGTTGGACGA ATTGGGCTAT ATCCCCAACC GCGCTCCCGA TATTCTCTCT AATGCCACCA GCCATGCCAT TGGTGTGCTG CTGCCGTCGT TAACTAATCA GGTTTTTGCT GAGGTTTTGC GGGGGATAGA GAGTGTGACG GATGCGCACG GTTACCAGAC GATGCTGGCT CACTACGGCT ATCAGAAAGA GCGCGAAGAG CAGCGGCTGA CGTCGCTTCT CTCCTACAAT ATTGATGGCC TCATCCTCTC TGAACGCCAC CATACCGCGC GGACCCTGAA AATGATTGAG GTCGCGGGTA TCCCTGTTAT TGAGCTAATG GATTGTATTT CGCCTTGCCT TGATCTGGCC GTGGGGTTTA ATAACTTTGA GGCTGCCCGG CAGATGACAC AGCAAATTAT CGCTAAAGGC CATCGCTATG TGGTGTATTT TGGCGCTCGC CAAGATGAGC GCACGGTGAT CAAGCAGCAG GGCTATGAGC AAGCGATGCG CGAATCCGGT CTGGTACCGA TGAGCGTGAT GACCAGCCGT TCATCGTCAT ATTCCGCTGG CGCTGAACTG CTACGTGAAG CGCAGGTCAG TTATCCACAA ATCGACAGTA TTTTCTGTAC CAATGATGAT TTAGCCATTG GTGCCGTATT TGAATGTCAG CGTCAGGGGC TATCCATCCC CCATGACATG GCTATTGCCG GTTTCCATGG CCATGATATC GGCCAGTCGA TGGTACCGAA ACTGGCCAGC GTACTGACAC CGAGGGAAAG AATGGGGCAA ATCGGTGCCG AGCGTTTATT GGCCAGGTTG CGCGGAGAAG TGGTAACACC CCAAATGGTG GATGTCGGCT TTACCATCCT CCCCGGTGGC AGTATATAA
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Protein sequence | MTVSRYLRNP EQVSAVLQEK IALALDELGY IPNRAPDILS NATSHAIGVL LPSLTNQVFA EVLRGIESVT DAHGYQTMLA HYGYQKEREE QRLTSLLSYN IDGLILSERH HTARTLKMIE VAGIPVIELM DCISPCLDLA VGFNNFEAAR QMTQQIIAKG HRYVVYFGAR QDERTVIKQQ GYEQAMRESG LVPMSVMTSR SSSYSAGAEL LREAQVSYPQ IDSIFCTNDD LAIGAVFECQ RQGLSIPHDM AIAGFHGHDI GQSMVPKLAS VLTPRERMGQ IGAERLLARL RGEVVTPQMV DVGFTILPGG SI
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