Gene YPK_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0134 
Symbol 
ID6091313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp161125 
End bp162063 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content53% 
IMG OID641595194 
ProductLacI family transcription regulator 
Protein accessionYP_001718900 
Protein GI170022395 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTCA GCCGTTATTT GCGGAATCCA GAACAGGTTT CTGCTGTTTT ACAGGAAAAA 
ATCGCGCTGG CGTTGGACGA ATTGGGCTAT ATCCCCAACC GCGCTCCCGA TATTCTCTCT
AATGCCACCA GCCATGCCAT TGGTGTGCTG CTGCCGTCGT TAACTAATCA GGTTTTTGCT
GAGGTTTTGC GGGGGATAGA GAGTGTGACG GATGCGCACG GTTACCAGAC GATGCTGGCT
CACTACGGCT ATCAGAAAGA GCGCGAAGAG CAGCGGCTGA CGTCGCTTCT CTCCTACAAT
ATTGATGGCC TCATCCTCTC TGAACGCCAC CATACCGCGC GGACCCTGAA AATGATTGAG
GTCGCGGGTA TCCCTGTTAT TGAGCTAATG GATTGTATTT CGCCTTGCCT TGATCTGGCC
GTGGGGTTTA ATAACTTTGA GGCTGCCCGG CAGATGACAC AGCAAATTAT CGCTAAAGGC
CATCGCTATG TGGTGTATTT TGGCGCTCGC CAAGATGAGC GCACGGTGAT CAAGCAGCAG
GGCTATGAGC AAGCGATGCG CGAATCCGGT CTGGTACCGA TGAGCGTGAT GACCAGCCGT
TCATCGTCAT ATTCCGCTGG CGCTGAACTG CTACGTGAAG CGCAGGTCAG TTATCCACAA
ATCGACAGTA TTTTCTGTAC CAATGATGAT TTAGCCATTG GTGCCGTATT TGAATGTCAG
CGTCAGGGGC TATCCATCCC CCATGACATG GCTATTGCCG GTTTCCATGG CCATGATATC
GGCCAGTCGA TGGTACCGAA ACTGGCCAGC GTACTGACAC CGAGGGAAAG AATGGGGCAA
ATCGGTGCCG AGCGTTTATT GGCCAGGTTG CGCGGAGAAG TGGTAACACC CCAAATGGTG
GATGTCGGCT TTACCATCCT CCCCGGTGGC AGTATATAA
 
Protein sequence
MTVSRYLRNP EQVSAVLQEK IALALDELGY IPNRAPDILS NATSHAIGVL LPSLTNQVFA 
EVLRGIESVT DAHGYQTMLA HYGYQKEREE QRLTSLLSYN IDGLILSERH HTARTLKMIE
VAGIPVIELM DCISPCLDLA VGFNNFEAAR QMTQQIIAKG HRYVVYFGAR QDERTVIKQQ
GYEQAMRESG LVPMSVMTSR SSSYSAGAEL LREAQVSYPQ IDSIFCTNDD LAIGAVFECQ
RQGLSIPHDM AIAGFHGHDI GQSMVPKLAS VLTPRERMGQ IGAERLLARL RGEVVTPQMV
DVGFTILPGG SI