Gene YPK_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0105 
Symbol 
ID6088471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp124273 
End bp125070 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content50% 
IMG OID641595165 
ProductCDP-diacylglycerol pyrophosphatase 
Protein accessionYP_001718871 
Protein GI170022366 
COG category[I] Lipid transport and metabolism 
COG ID[COG2134] CDP-diacylglycerol pyrophosphatase 
TIGRFAM ID[TIGR00672] CDP-diacylglycerol pyrophosphatase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGA AAAAATCATC AGTGTCACGC TCAATAAAAT GGCGTAGATA CTTACTGACA 
TTGCTGATCT TGATCATACT GGCTGCAGGC CTGATTTATA AATTACGTTT CAGTAATGCG
GATGCACTCT GGAAGATCAT TAGCCAGCAA TGTATTCCGC ATATGACCAC AGAAGATGAT
CCGCGCCCTT GTGCCGAGGT GAATATACCC GCGAGCTTTG CGGTGCTTAA AGATAGGAAT
GGCCCGTTAC AGTATTTGTT GATCCCCACC GTACCCATTA GCGGTATTGA AAGCCCGCAA
TTATTAACCG CCACCAGCCC GAACTATTTT GCCGACGCTT GGCAGGCTCG CTATTTTATG
GCTGAGAAGT ACGGCGCGCC TATCGATGAC ACTGATATCT CATTAGCCAT CAATTCACAA
TATGGGCGCA CACAGGATCA ATTGCACATT CATATCTCTT GTCTGAAGCC ACAAGTAAAA
ACCGCACTGG CCGCCCATAG CGCCGATTTC CAGCAACAAT GGCAGCCGCT GCCTGGCGGC
TTACTGGGAC ACGATTATTG GGTACGGCGC ATCACAGCAA CCGAATTGCA ACAACCAGGG
CCGTTCCATC TGTTAGCCGA TGAAATGCCA GGGGCAAAAG AACAGATGGG CCGTTACGGT
CTGGCAATAA CCGCACTGCC CTCTGGGGAT TTTTTACTGT TGGCCGACAA AGCGAACCTG
ATGACGCAGG ATCGCGCCTC AGCAGAGGAA CTGCAAGATC ACACCTGTCA GGTGCTACCT
CACCCCCCGG TGCAATAA
 
Protein sequence
MIMKKSSVSR SIKWRRYLLT LLILIILAAG LIYKLRFSNA DALWKIISQQ CIPHMTTEDD 
PRPCAEVNIP ASFAVLKDRN GPLQYLLIPT VPISGIESPQ LLTATSPNYF ADAWQARYFM
AEKYGAPIDD TDISLAINSQ YGRTQDQLHI HISCLKPQVK TALAAHSADF QQQWQPLPGG
LLGHDYWVRR ITATELQQPG PFHLLADEMP GAKEQMGRYG LAITALPSGD FLLLADKANL
MTQDRASAEE LQDHTCQVLP HPPVQ