Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2314 |
Symbol | |
ID | 6120082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2472591 |
End bp | 2474288 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641650250 |
Product | putative inner membrane protein translocase component YidC |
Protein accession | YP_001776786 |
Protein GI | 170731353 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGA CTCGTGTATT ACTGATATTT TCCTGGCTGA CGGTAGCAAC ACTGTTGTGG ATGGATTGGG GTAAAAATAA AAATGAAACA CTAGAAATCT CGGCTTCTCA TAATCTTGGT GTTGATAGCC ATTTGGAGTT GGAGCACGCA GTCCCACAAA TTAATGCTGG CGCAGTTCCA GTTCAAAAAG ACTCACAATT AATTGCAGCT GCTCCGAAAG TGCCTGTGAT CAATGTAACA ACTGATGTCC TACAGCTAAA ATTAGATGGA TTTAGCATAC TTGCTGCTGA CTTATTACGT TTTCCTCAAA GTAAAGATCG GGGTGCTAAG CCAATTAAGT TGCTTACAGA TGATCCAAAT TATCCTTACA GTGCCACTAC TGGTTGGGTA AGCCAGAGTA ATTCTCCAGT GCCGAATTTG AGTACATTTC TTCCTGAGCA GTCAGGTGTT TCCTATAAAT TGGCCAATGA TCAAGATCGT TTAGTGGTCC CGTTTGTTTG GACAGCTGCA AATGGAGTCA GCATTCGCCG AACATTTACT TTCGAACGTG GTCGCTATGC CATCTTAATT AGAGATGAAA TCCGTAACAG TGGCGAGACC CCTTGGAACG CTTATGTTTT CCGTAAGTTG AGTCGGGTAC CTATACCTAA TATCTTAAAC CGCGCCATGA CCAATCCAGA CTCGTTCAGT TTTAACGGCG CTGTTTGGTA CAGTGAGAAA GGTGGTTATG AACGTCGTGC GTTTAAGGAT TATATGAATG ATGGCGGCCT TAATCGAGAA ATTGGTGGTG GTTGGATCGC GTTGCTTCAA CATCATTTTT TCACTGCATG GATCCCGCAG AAAGATCAAG CATCGTTGTA TTTATTAGCT CAGAATGGTT CACGTGATAT AGCTGAACTG CGTGGGCCTG CTTTTACGGT AGCGCCTGGT CAAAGTACAA TGACGGAGGC CAGATTGTGG GTGGGTCCGA AGCTGGTCGA GCAAATTACT AAAGAGCATG TCAAGGGATT AGATCGTGTT GTTGACTATA GTCGCTTCCA ATTAATGGCA TTGATTGGTC AAGGTTTATT TTGGATCTTG AGTCACCTGA ACAGTCTTTT GCATAACTGG GGATGGGCTA TTGTCGGTTT GGTAGTCTTG CTTCGTATTG CCATGTACCC TTTAAGTGCT GCTCAATATA AATCCGCAGC GAAAATGCGT AAATTTCAAC CGCGCCTGCA GCAGCTTAAG GAACGCTATG GTGAGGATAG GCAAAAGTTC CAGCAAGCGA TGATGGAACT ATATAAGAAA GAAAAAATTA ATCCCATGGG GGGGTGCTTC CCTATTTTAA TTCAGATGCC GATTTTCTTT GCGCTGTATT GGGTGTTGGT TGAGTCTGTT GAGTTGCGTC AAGCACCTTG GCTGGGTTGG ATCCAGGATC TGACTACGCG CGATCCTTAT TTTATCTTGC CGCTTCTCAA TATAGTAATC ATGTGGGCAA CACAAAAACT GACTCCGACA CCAGCTGGTA TGGATCCTAT CGCTGGAAAA ATGATGCAGG TGATGCCGTT GATTTTTGGT GTGATGATGG CTTTTGTGCC CTCCGGTTTA GCATTGTATT GGGTGATCAA TGGTGGTTTA AATTTGTTAA TCCAATGGTG GATGATTCAT CAATATGCAG ATTTTTCACG TAAAAGGAGT AGAGAAAATA TTAAATAA
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Protein sequence | MNQTRVLLIF SWLTVATLLW MDWGKNKNET LEISASHNLG VDSHLELEHA VPQINAGAVP VQKDSQLIAA APKVPVINVT TDVLQLKLDG FSILAADLLR FPQSKDRGAK PIKLLTDDPN YPYSATTGWV SQSNSPVPNL STFLPEQSGV SYKLANDQDR LVVPFVWTAA NGVSIRRTFT FERGRYAILI RDEIRNSGET PWNAYVFRKL SRVPIPNILN RAMTNPDSFS FNGAVWYSEK GGYERRAFKD YMNDGGLNRE IGGGWIALLQ HHFFTAWIPQ KDQASLYLLA QNGSRDIAEL RGPAFTVAPG QSTMTEARLW VGPKLVEQIT KEHVKGLDRV VDYSRFQLMA LIGQGLFWIL SHLNSLLHNW GWAIVGLVVL LRIAMYPLSA AQYKSAAKMR KFQPRLQQLK ERYGEDRQKF QQAMMELYKK EKINPMGGCF PILIQMPIFF ALYWVLVESV ELRQAPWLGW IQDLTTRDPY FILPLLNIVI MWATQKLTPT PAGMDPIAGK MMQVMPLIFG VMMAFVPSGL ALYWVINGGL NLLIQWWMIH QYADFSRKRS RENIK
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