| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2232 |
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| Symbol | |
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| ID | 6120848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2353370 |
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| End bp | 2354728 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641650173 |
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| Product | virulence protein |
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| Protein accession | YP_001776713 |
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| Protein GI | 170731280 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3946] Type IV secretory pathway, VirJ component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.581965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAT CTAAAATCCG CTCAGTCCTA CAGAGCATTG CTCTGCTTGT ATTGGCGGGT
ACCGCTGCAG CCGAGCCTAA ACTAGAGAAG ATCACTCATG GCAGGTTCGA GCAGATCCCG
GTCCTGCGTC CGGATGGTGA ACCACAGCGC GTGGTGATCT GGTTCAGTGG TGCTGGGCAT
GTTGACCAGC GTACCCGTCA GGCGGAATTA TTAAGGCAGG ACGGGGCAAT GGTTGCACTG
GTTGATACGA CCCATCTGTA TAAAGTGCTC GCTTCTGATT CTAATCACTG TACATTTTCT
GTCGGCGATG TCGAGAATTT GTCGCGTTAT CTGCAAGCTT ACTATCGATA TAAAACATAT
CGGCTTCCAT TATTAGTCGG TGATGGTGAT GGCTCGGGGC TAGTCTATGC GGTTGCTGCG
CAGGCGCCTG AAAATATACT TGCTGGTGTG GTGACCGATG GATTGTGTCC GGTAGTGGTG
CCTACGCATG CGGTTTGTGG GGCTGGTGTG GCGAGTGATC AGCATCTCAA GCCGGCGCCA
GTTGCCGCTC CTTTACTTGT CATGACGGTC TCATCTGCGC ATTGTCCAGC GCAATTGACC
AGCGAATTCG TCCGTAAGGT CGCACTTGGG CGTGAAATCA GACTTGCAGC AAGTGCTGAT
CTACTGCCCC GCTTACGGGC AGTGCTACGC GTGTTAGGCG CACAAAAAGG TGTGAGTTTG
CCGCCACCGC CTGCTGATCT GGATGGACTA CCAGTGGTGG AGGTGCCGAG TAAAGCACAA
AAGAAAAGTG ACACCTTTGC AATCTTTGTT TCTGGCGACG GAGGTTGGGC CGAAATCGAC
AAGAAGGTGG CAGGACATCT GGCCGATGCT GATATTCCTG TAGTGGGTTT GGATTCACTG
CGGTACTTCT GGAGCGAACG TACCCCGGAA GGCTTTGCTA AAGATCTGGA CCGCATTGCA
CGCTTTTATG CTCACCACTG GAAGCGTAGC CGTTTGTTGC TGGTCGGATT CTCTCAAGGT
GCAGACGTGC TGCCTGCAGC GATTAATAAG CTTTCCCCCA ACACCCGCCC AATTATCCGT
ATGACTGCAC TATTGTCGTT AGGAAAATAT GCGCAATACG AATTTCATGT CAGCAACTGG
ATATCCACAG ACGACGAGGG TATACCGATT GCAGCAGACA TGGTCAAATT GAGATCCACA
AGAACAGTGT GTATCTATGG CGTGGATGAT CAAGAAACAC TGTGTCCATC ATTACCACAA
CAGAATCGTC GCGTTGCCTT ACCGGGCACA CATCACTTTA ATGGTGATTA TGAAACTGTC
GCCAAAACCA TCTTGGCGCA GATGGAAGCT GCACCTTGA
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| Protein sequence | MKQSKIRSVL QSIALLVLAG TAAAEPKLEK ITHGRFEQIP VLRPDGEPQR VVIWFSGAGH
VDQRTRQAEL LRQDGAMVAL VDTTHLYKVL ASDSNHCTFS VGDVENLSRY LQAYYRYKTY
RLPLLVGDGD GSGLVYAVAA QAPENILAGV VTDGLCPVVV PTHAVCGAGV ASDQHLKPAP
VAAPLLVMTV SSAHCPAQLT SEFVRKVALG REIRLAASAD LLPRLRAVLR VLGAQKGVSL
PPPPADLDGL PVVEVPSKAQ KKSDTFAIFV SGDGGWAEID KKVAGHLADA DIPVVGLDSL
RYFWSERTPE GFAKDLDRIA RFYAHHWKRS RLLLVGFSQG ADVLPAAINK LSPNTRPIIR
MTALLSLGKY AQYEFHVSNW ISTDDEGIPI AADMVKLRST RTVCIYGVDD QETLCPSLPQ
QNRRVALPGT HHFNGDYETV AKTILAQMEA AP
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