| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2192 |
|---|
| Symbol | |
|---|
| ID | 6120803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 2306940 |
|---|
| End bp | 2309057 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641650130 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001776675 |
|---|
| Protein GI | 170731242 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.857068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTCGTG CCACTCCTAT TCATCGTTAT CGTAACATTG GCATCATGGC TCATATTGAT
GCTGGTAAGA CCACTACCTC CGAGCGCATC CTTTTCTATG CTGGTGTATG TCACCAAATG
GGTGAAGTTC ATGATGGTGC TGCGGTGATG GATTGGATGG AGCAGGAACA GGAACGTGGC
ATCACTATCA CTTCCGCTGC GACTACTGTG TTTTGGTCCG GTATGGATAA ATCTATGCCG
CAGCACCGTT TTAATATCAT TGATACTCCA GGGCATGTTG ACTTCACCAT AGAAGTGGAG
CGTTCCCTGC GTGTGCTTGA TGGCGCGGTA TTCGTACTAT GTGCGGTCGG CGGTGTGCAG
CCGCAGTCCG AGACAGTGTG GCGTCAGGCT AATAAGTATT TTGTGCCACG CATGGCTTTC
GTCAATAAGA TGGATCGTAC TGGTGCTAAC TTTGATAAAG TCGTCGAGCA ATTGAAGGCG
CGTCTAGGTG CTTATCCTGT GCCTATGCAA GTGCCGATTG GTGCAGAAGA TGGTTTTGAG
GGGGTGATTG ACCTTCTGAA AATGAAAGCT ATCCATTGGG ATGCTGCGTC GCAGGGCACT
GTCTTTGAAT ACCGTGATAT CCCCATTGAA TTAGTTGATA AAGCTTCAAA GGCGCGTGCC
TTTATGGTCG AGGCCGCCGC AGAGGCGACT GAAGAATTAA TGGATAAGTA CCTGAATGAA
GGTGAGTTGA AAGAACAGGA AATATTAGAA GGGCTCCGTG AGCGAACATT GAAGGTTGAA
ATTATACCTG TGTTTTGTGG TTCAGCATTC AAGAATAAGG GTGTGCAAGC GATGCTTGAT
GGCGTCATAC ACCTATTGCC TTCGCCAGCT GACCGCCCTC CAGTGCAGGG TTTGGATGAA
AAAGGGAACG AATGCCGCTG CAAGGCTTCG GATAGCGAGC CTTTTTCGGC TTTAGCCTTC
AAGATTATGA CTGATCCATT TGTTGGTTCG CTGACATTCT TTCGTGTTTA CTCTGGTGTA
CTGAATTCTG GTGACCAAGT GTATAACTCC GTCAAATTGA AAAAGGAACG TGTGGGACGG
ATTTTACAAA TGCACTCCAA CCAACGGGAC GAAATAAAAG AAGTTCGTGC TGGTGACATA
GCTGCTGCGG TAGGTCTGAA GGATGTCACA ACTGGCGATA CTCTATGTGA CCAAAACCAT
ATCATCATTC TAGAGCGGAT GATTTTCCCT GAACCGGTGA TTTCAATGGC GGTTGAGCCT
AAGACTAAAT CCGATCAGGA AAAAATGGGA ATGGCTCTGG GACGTCTTGC GCAGGAAGAT
CCTTCTTTCC GTGTCAAGAC TGACGAGGAA TCAGGTCAAA CCATTATTTC GGGTATGGGT
GAACTGCATC TAGACATTAT TGTTGACCGT ATGCGTCGTG AATTTAATGT AGAGGCCAAT
GTTGGTAAGC CACAAGTAGC TTATCGTGAG ACGATCCGTA AGAGTGATGT GAAGTCGGAT
TATAAACACG TAAAACAGTC GGGTGGTAAG GGTCAGTATG GTCATGTGGT GATTGAGATT
TCGCCAATGA GCGATGTCGA TAAACAGCAT CCAGATGTGA AGGGTGATTT TTTGTTTATT
AACGAAATTA CCGGCGGTGT TATACCTAAA GAATTTATCT CACCGATTGA GAAGGGATTG
CGTGAAACTA TTACCAGTGG TCCGTTGGCT GGTTTCCCGG TCGTCGGGGT GAAAGTTAAG
CTGGTTTTCG GTTCATACCA TGATGTTGAC TCCTCAGAAA TGGCGTTTAA GCTTGCTGCC
TCAATGGCGT TCAAACAGGG TTTCGCTAAG GCTAATCCTG TGTTACTCGA GCCAATCATG
AAGGTTGAAA TTGTCAGTCC TGAGGATTAT TTGGGGGATA TCATGGGTGA TGTAAGTCGT
CGCCGTGGTA TTTTGCAAGG GCAGGATGAT AGTCTTTCGG GCAAGGTTAT CAATGCGATG
ATTCCATTGG GCGAGATGTT TGGATATGCC ACCTCCCTGC GTTCGATGAC GCAAGGACGG
GCTACTTTTG CGATGGAATT TGACCATTAC GAAGAGGCAC CTACCAACAT TGCCGATACT
GTCATCAAGA AAACTTAA
|
|---|
| Protein sequence | MVRATPIHRY RNIGIMAHID AGKTTTSERI LFYAGVCHQM GEVHDGAAVM DWMEQEQERG
ITITSAATTV FWSGMDKSMP QHRFNIIDTP GHVDFTIEVE RSLRVLDGAV FVLCAVGGVQ
PQSETVWRQA NKYFVPRMAF VNKMDRTGAN FDKVVEQLKA RLGAYPVPMQ VPIGAEDGFE
GVIDLLKMKA IHWDAASQGT VFEYRDIPIE LVDKASKARA FMVEAAAEAT EELMDKYLNE
GELKEQEILE GLRERTLKVE IIPVFCGSAF KNKGVQAMLD GVIHLLPSPA DRPPVQGLDE
KGNECRCKAS DSEPFSALAF KIMTDPFVGS LTFFRVYSGV LNSGDQVYNS VKLKKERVGR
ILQMHSNQRD EIKEVRAGDI AAAVGLKDVT TGDTLCDQNH IIILERMIFP EPVISMAVEP
KTKSDQEKMG MALGRLAQED PSFRVKTDEE SGQTIISGMG ELHLDIIVDR MRREFNVEAN
VGKPQVAYRE TIRKSDVKSD YKHVKQSGGK GQYGHVVIEI SPMSDVDKQH PDVKGDFLFI
NEITGGVIPK EFISPIEKGL RETITSGPLA GFPVVGVKVK LVFGSYHDVD SSEMAFKLAA
SMAFKQGFAK ANPVLLEPIM KVEIVSPEDY LGDIMGDVSR RRGILQGQDD SLSGKVINAM
IPLGEMFGYA TSLRSMTQGR ATFAMEFDHY EEAPTNIADT VIKKT
|
|---|
| |