Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2107 |
Symbol | |
ID | 6120312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2208626 |
End bp | 2209489 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641650051 |
Product | prepilin peptidase |
Protein accession | YP_001776597 |
Protein GI | 170731164 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTC TTGATCAGCA CCCCGGACTC GGCTATCCCC TTGCGTCCGG TTTGGGGTTG TTGCTTGGTA GTTTTCTCAA TGTGGTGATC CTGCGTTTGC CGCGCCGTTT GGAATGGCAA TGGAAGCGCG ATGCGCGCGA AATCCTGGAG ATGCCGGACA TTTATGATCC GCCACCACCG GGAATTGTGG TCGAGCCTTC CCACGATCCA GTGACTGGTG ATCGGTTGAA GTGGTGGGAA AACATTCCGG TGCTTAGTTG GTTGTTGCTA CGTGGACGCT CGCGTTACAG CGGCAAGTCA ATCTCGTTGC AGTATCCGTT GGTCGAATTG CTGACTTGCC TGCTGGTGCT GGCCAGTGTT TGGCGTTTTG GATTCGGTTG GCATGGCTTT GGGGCAATTG TGTTCAGTTG TTTCCTGGTT GCGTTGGCTG GGATTGATTT GCGTACTCGG CTCTTACCTG ACCAGTTAAC TTTAATGCTT ATGTGGCTGG GTTTGATTGG ATCTGCGGAT AACTTGTTTA TGGCAGCCAA ACCTGCGTTA TTGGGGGCTG CAGTTGGTTA TTTATCTCTG TGGATTGTGG CGGCGTTGTT CAAACTGATC TTTAACAAGG AAGGGATGGG CCATGGTGAC TTCAAAATGC TGGGCGCGCT TGGGGCATGG TGTGGGTTGA AGGGTATTCT CCCGATCATT TTGATTTCAT CACTGGCTGG AGTGGTATTG GGCTCCGTTT GGCTTGTTGT GCGTGGTCAT AACCGTACGA CGATGATTCC GTTTGGACCT TATCTGGCAG TTGGTGGATG GATTGTGTTC TTTTTCGGCG ATCAGATCAT CCATGCTTAT CTGGAGCTAT TAAGTATCGG GTGA
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Protein sequence | MAFLDQHPGL GYPLASGLGL LLGSFLNVVI LRLPRRLEWQ WKRDAREILE MPDIYDPPPP GIVVEPSHDP VTGDRLKWWE NIPVLSWLLL RGRSRYSGKS ISLQYPLVEL LTCLLVLASV WRFGFGWHGF GAIVFSCFLV ALAGIDLRTR LLPDQLTLML MWLGLIGSAD NLFMAAKPAL LGAAVGYLSL WIVAALFKLI FNKEGMGHGD FKMLGALGAW CGLKGILPII LISSLAGVVL GSVWLVVRGH NRTTMIPFGP YLAVGGWIVF FFGDQIIHAY LELLSIG
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