Gene Xfasm12_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2078 
Symbol 
ID6120282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp2175511 
End bp2176191 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID641650024 
Productpermeases-like protein 
Protein accessionYP_001776571 
Protein GI170731138 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGTG GGCGTGCAAC TGCTCCTCAT GCCGAGCACC ACCAAACTGT ACTTCGGATG 
TGTATGAGAA CCAGCTCCGT CGCAATACTC ACGGGTGCAG CATCGGGCTT CTTCGGGATT 
GGTGGCGGTT TTCTGATCGT GCCCGCCCTC ATTTTTGCGA CTAGGATGCC CACTATCAAC 
GCCATTGGCT CCTCGTTACT CGCGGTCGGC ACCTTTGGGC TCATCACTAC CTTGAACTAT 
GCACGCCACG ACCTGGTGGA CTGGACGATT GCCATGGAAT TCATCGTAGG CGGTATTACA 
GGAGGAGGGC TAGGCACACT CCTAGCAACC CGACTTTCAG CAAGCAAACA CCTGCTCAAT 
CGGGTTTTCG GGTTGATCGT AATTGCTGTC GCGATCTATG TCATTTGGCG GAGTTGGGCT 
TCTCTCGTAG CTTGGCTCGA TATCCCCCCT GGGCTACCAG AAAGGACAAT GGCATTCGGA 
TTCTTTCGTG AGTATTCATG TCAAAGATGC CCAGGGAGCA CCATCAAGCA CGTACAACCC 
GTGATCCATG CACTCAACTC ACCGTGCATA TCCCCCAGTG CTAGATTTTC AATACTGCTC 
TGCCACCCGA TGTTTACTGT AGAACGGCTA CCGGCATATG GCTCACACCA CTTGTGCGCG 
CTCTCAAGCT CACTCCCTTA A
 
Protein sequence
MLRGRATAPH AEHHQTVLRM CMRTSSVAIL TGAASGFFGI GGGFLIVPAL IFATRMPTIN 
AIGSSLLAVG TFGLITTLNY ARHDLVDWTI AMEFIVGGIT GGGLGTLLAT RLSASKHLLN 
RVFGLIVIAV AIYVIWRSWA SLVAWLDIPP GLPERTMAFG FFREYSCQRC PGSTIKHVQP 
VIHALNSPCI SPSARFSILL CHPMFTVERL PAYGSHHLCA LSSSLP