Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2008 |
Symbol | |
ID | 6121092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2096632 |
End bp | 2099004 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641649959 |
Product | antigen |
Protein accession | YP_001776507 |
Protein GI | 170731074 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3537] Putative alpha-1,2-mannosidase |
TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.154316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAC GACGCACTTT TTTGCGGGGT GCGATCAGCC TGACGCTGAT TGGCAGCACT GGCCAGCTAC GTGCTCTGGC ACATCCACGC GCCAATACCT GGGCACTGCC CATTGACACA CAGGCACAGG CGGATCTGAC GCGTTACGTG GATGTGTTTA TCGGCAGCAG CGGTCATGGG CACACCTTCC CAGGGGCTAC GCTGCCTTTT GGCATGGTGC AACTCAGCCC GGACACCGAT AACGCGGTCT GGGATGCTTG CTCCGGCTAT CACGCCTCCA ACGGCTCGAT CATGGGGTTC TCGCACACTC ACCTCTCCGG CACGGGCATT GGCGACATGT TGGACATTTT GCTCATGCCT GGGACTGGGG ACGTGAAGCT GACACCCGGG CCGCTCAATG CTCCTGAGAC CGGCTACCGG CAACGCTACG ATCACGCCGA GGAAGTGGCC TCGCCTGGTT ACTACCAGGT GCGCCTGAAG GACACGGACA TTGTGGCCGA GCTGACCGCC ACCGCACGGA CTGGCCTGCA TCGTTACCAT TTCCCTCAAC ATCAAGCCGG TCACCTGCTG TTGGACTTGA GCCACGGGAT GCAGGACAAC CCAACCACCC CACCACGGTT GCGCGAGGTG GAGTTATCGA TCGTCGATCC ATGTACGCTG CTGGGCGGCC GCCGTGTGTA TCAGTGGGCC AAGGGCCGCT ATATCTTCTT CGCCATGCGG TTGTCACGCC CGTTTGCACG TGCACAGTTG TATAGCAACG ATGCGCCACT GACTGCGGGC ACGCGCCAGG TTCAGGGCGT GTGTCTGAAA GCGGCGTTGC ACTTCCCCGA TGCGGGCGAG GCGCCGTTGC TGGTCAAAGT CGGCCTGTCT GCGGTCAGCG CCGCAAATGC GCTTGCCAAT CTCAACGCCG AATTGCCGGA TTTCGATTTC GCCCGTGTGC ATGCCGAGGC CGTGGCGGCC TGGGAGAACG CTCTAGGGCG CGCGCGGATC GCAACCGACA ATCCGGCGCA ACGTCGCATT TTTTACACCA GTCTGTACCA CAGTCTGCTG GCGCCCACGT TGTTCAGTGA TGTTGATGGG CGCTACCGCG GTATGGATCT CCAGGTGCAT ACGCTGCCAG CTGGCTACCA CAATTACAGT ACCTACTCTT TATGGGACAC CTACCGCGCG CTGCATCCGC TGCTGACGCT GGTGCAGTCG GATCGGGTCC CGGATCTGTT GCAATGTCTG GTCCGTGGCG CGGCTGAGTG TCCGGACGGT GTCGGGATCT GGCCATTACA GGGCGTGGAG ACCGGCTGCA TGATCGGCTA TCACTCCGCG GTAGCACTCG CCGAGGGCTA TACAAAAGGA TTCACTGGCA TCGACTATGC GGCGGCTTGG CCGCACTACC GCAAGCGCGC CATGCAGGAT CACGCTCACG GTCTGCGGTA CTACCGCAGG CTCGGCTATA TCCCCAGTGA CAAGGTGGAT GAATCCGTCA GCCGGACGCT GGAGTATGCC TATGACGATT GGGCGTGTGC GCATTTGGCC ACCGCCGCAG GGGCGCACAG TGAGGCACGG GTGCTACGCG CACGCTCCCG CCAGTATCGC CATGTGTTCA ACCGCGACAG TGGCTTTATG CAACCGCGTC TGGAAAATGG TGCCTGGGCA ACGCCGTTTG ATCCACGCGC GTTGGAGCAC TTGAAGCAGT GGCACGATTT CACGGAGTGC AATGCTTGGC AGGCAACGTT CCTCAATCAG CACGATGTGT ACGGTTATAT GGCTCTGTTC GGCGGCGCTG ATCACTTTGC CGCCAAACTC GACGCTCTGT TTTCTGCACT CTCGGAATTG CCGCCAGGGG CACCACCGGA TATTGATGGG ATGGTGGGTC AGTACGCCCA CGGTAACGAG CCAAGCCACC ATATCGCCTA TCTGTACGTG TACGCGGGGC AAGCGTACAA AACGCAAGCG ATGGTGCGCC GCCTACTCCG GGAGCAATAC CATGATGGGC GCGATGGTCT GTCCGGGAAT GAGGATTGCG GGCAGATGAG TGCTTGGTTT GTGCTCAGTG CGCTGGGGAT GTACGCAGTG GATCCGGTCA GCGGTATCTA TGTGATCGGC AGCCCGTTGT TCCCATACGC GGAGTTGGAC GTGGGCCGAG GCCGTAAGCT GCGCATCTTG GCGCGTCACA CCAGTGCGTC CAATGTCTAT GTGCAAGCAC TGCGCTGGAA CGGCAGTCCG ATGACGTGTG CTTGGCTGCG CCACACTGAA TTGGCAGGAG GGGGGACGCT GGAATTTGAG ATGGGTGCGC AACCGAATCT CGATTTCGGC ACCCATCCGC AGGATCTGCC TCCATCTTTC ATGGCATTGC AGTCAGTTCC GAAACACGCA TGA
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Protein sequence | MATRRTFLRG AISLTLIGST GQLRALAHPR ANTWALPIDT QAQADLTRYV DVFIGSSGHG HTFPGATLPF GMVQLSPDTD NAVWDACSGY HASNGSIMGF SHTHLSGTGI GDMLDILLMP GTGDVKLTPG PLNAPETGYR QRYDHAEEVA SPGYYQVRLK DTDIVAELTA TARTGLHRYH FPQHQAGHLL LDLSHGMQDN PTTPPRLREV ELSIVDPCTL LGGRRVYQWA KGRYIFFAMR LSRPFARAQL YSNDAPLTAG TRQVQGVCLK AALHFPDAGE APLLVKVGLS AVSAANALAN LNAELPDFDF ARVHAEAVAA WENALGRARI ATDNPAQRRI FYTSLYHSLL APTLFSDVDG RYRGMDLQVH TLPAGYHNYS TYSLWDTYRA LHPLLTLVQS DRVPDLLQCL VRGAAECPDG VGIWPLQGVE TGCMIGYHSA VALAEGYTKG FTGIDYAAAW PHYRKRAMQD HAHGLRYYRR LGYIPSDKVD ESVSRTLEYA YDDWACAHLA TAAGAHSEAR VLRARSRQYR HVFNRDSGFM QPRLENGAWA TPFDPRALEH LKQWHDFTEC NAWQATFLNQ HDVYGYMALF GGADHFAAKL DALFSALSEL PPGAPPDIDG MVGQYAHGNE PSHHIAYLYV YAGQAYKTQA MVRRLLREQY HDGRDGLSGN EDCGQMSAWF VLSALGMYAV DPVSGIYVIG SPLFPYAELD VGRGRKLRIL ARHTSASNVY VQALRWNGSP MTCAWLRHTE LAGGGTLEFE MGAQPNLDFG THPQDLPPSF MALQSVPKHA
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