Gene Xfasm12_1893 details

Gene Information

• Locus tag: Xfasm12_1893
• ID: 6120172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 1974201
• End bp: 1974740
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641649851
• Product: phage-related integrase
• Protein accession: YP_001776401
• Protein GI: 170730968

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTATCGC TTCAGGAGTC AGCCGCGTTA TGGGATGCCG CGATACTCCC TCATGAACGT 
ATGTACCTTG CGCTCGCTTA TGGAACTCTG GCAAGGCCAG AGGCGATCCT CGGACTATGG 
CGTGAGTTCG CAGACACCCA ACGACGCCTA TTGACGCAGA ATCCACCAGG GCGCAAGCAG 
ACGAAAAAGC ACCGGCCCGT TGTTCCGATC TGTGATTTTC TCCTTCCTTG GATATTGTCA 
GTAGACAGCG GCCCGCTGGT GCACTGGCAT GGGAAACCTA TCGCGAGCTT CAAAACTGCG 
TGGCGCGCAT TACGGACACC GGCAGATCTA CCCAAGGACA CCGTTCCGAA GGTGATCCGG 
CACACGATGG CTACCGAGCT ACGCTCGGCG GGTGTGTCTG CCCAAGACAT TCAAGGGATG 
CTGGGGCACC GTGCACATGG TGGGACTACG GATGTTTATA CCAAGTACCG TCCTGACTAT 
ATGGCCGATG CTGTCCGCGG TATTGATGCG TACATGGCCC AGCTGCGCGC CAGTCAATAA 

 

Protein sequence

MLSLQESAAL WDAAILPHER MYLALAYGTL ARPEAILGLW REFADTQRRL LTQNPPGRKQ 
TKKHRPVVPI CDFLLPWILS VDSGPLVHWH GKPIASFKTA WRALRTPADL PKDTVPKVIR 
HTMATELRSA GVSAQDIQGM LGHRAHGGTT DVYTKYRPDY MADAVRGIDA YMAQLRASQ