Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1850 |
Symbol | |
ID | 6121571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1923404 |
End bp | 1925989 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649814 |
Product | ATP-dependent Clp protease subunit |
Protein accession | YP_001776364 |
Protein GI | 170730931 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.808048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATGG ATAAGCTTAC TTCCCGTTTC CAGAATGCGT TGGCTGATGC GCAATCGCTG GCCGTCGGTC GTGACCATAC TATTATTGAG CCGGTGCATG TTTTTTCGGC ATTGCTTGAT CAGCAGGGGG GGAGTACACG TCCGTTGCTC GTGCAGGCCG GTGTCAATGT GCCATTGCTG CGTGAGCGGT TGACCGAGAT ACTTGAGGCA TTGCCGAAAG TGAGTGGTCA GACGGTTAAT GTCTCACCCA GCAATGAATT GAGTCGTTTG TTTCATCGGA CTGATAAGTT AGCGCAGCAG CATGGCGATC AGTTTATGGC CAGTGAGTGG TTCGTGTTGG CTGTGGTCGA TGATAGTGGG GGGCTGGGCC AGGCGTTGCG TGCTGCTGGT GCGGAAAAAA AGAAGATTGA GGCTGCGATT GATAAATTGC GTGGCGGTGA AACTGTCCAG ACTGAGAATG CTGAGGAGCA GCGTCAAGCG TTGGAAAAGT ACACGATTGA TCTGACTGCC AGGGCTGAGA GTGGCAAGCT TGATCCGGTG ATTGGTCGTG ATGAGGAAAT TCGCCGCACG ATACAGGTAT TGCAGCGGCG TACAAAAAAT AATCCTGTGC TGATTGGTGA GCCGGGTGTG GGTAAAACTG CCATTGTAGA AGGTCTGGCT CAGCGCATTG TCAATGGTGA GGTTCCGGAA GGGTTGCGCA GTAAGCGTCT GCTCTCGCTG GATTTGGGGG CGTTGATTGC TGGGGCCAAG TTTCGTGGTG AGTTCGAGGA GCGCTTGAAG GGGGTGCTTA ACGATCTCGC TAAGAATGAG GGGCGGGTCA TTTTGTTCAT TGACGAGCTG CATACCATGG TTGGTGCCGG TAAAGCCGAT GGTGCGATGG ATGCTGGCAA TATGCTCAAG CCGGCGTTAG CACGTGGTGA GTTGCATTGT ATCGGTGCGA CTACGTTGGA TGAGTATCGC AAGTACATTG AGAAGGATGC GGCGTTGGAA CGCCGTTTCC AGAAGGTGTT TGTTGGGGAG CCGACGGTGG AGGATACCAT CGCAATTCTT CGTGGACTTA AGGAAAAGTA TGCGTTGCAC CACGGTGTGG AAATCACTGA TCCGGCTATT GTTGCTGCGG CTACGTTGTC TAATCGCTAC ATCACTGATC GTCAGTTACC AGATAAAGCG ATTGACTTGA TGGATGAGGC TGCCAGTCGT ATTCGTATGG AAATTGACTC CAAGCCGGAA GAGCTTGATC GTTTGGAGCG TCGGTTGATT CAGTTGAAAA TTCAGCGTGA GATGCTGAAG AAAGAAAAGG ATGAGGCGAG CAAGCAGCGT TTAGCCGATC TTGAGCGTGA TATTGAGGTT CTGGACCGTG AATTTTCCGA TCTGGAGGAG GTGTGGAGAT CAGAAAAAGC CGCGCTACAG GGGGCGACTA AGATCAAGGA GTCGATCGAG CAGGCCAAGC TTGATTTGGA AGCCGCGCAG CGCCGTCAGG ACTACGCCAA GATGAGCGAG ATTCAGTATG GTGTACTCCC CGCGTTGGAG AAGCAGCTGG TGGCAGCAAG TCAGGCGGAA CAGCACGATT TTACTTTGGT GCAGGAGAAA GTGACTGCTG AGGAGATTGC CGAGGTAGTT AGTCGTTGGA CTGGTATTCC AGTGAGCAAG ATGCTTGAGG GCGAGCGCGA TAAGTTGTTG CGTATGGAAG CTGATCTAGG TCGACGTGTG GTTGGTCAAG AGGAGGCGAT CAAGGTGGTA TCGGATGCGG TGCGCCGTTC GCGTACTGGT TTGTCTGATC CAAATCGACC GAGCGGCTCG TTCCTTTTTC TGGGTCCGAC GGGTGTTGGT AAGACTGAGT TATGTAAGGC GCTGGCTGAA TTTTTGTTCG ACAGTCAAGA TGCAATGGTC CGCATTGATA TGAGTGAGTT CATGGAAAAA CATTCTGTGG CGCGCCTGAT TGGTGCGCCT CCGGGCTATG TGGGTTATGA GGAAGGAGGT TATCTTACTG AATTGGTGCG ACGTCGGCCT TACTCTCTGA TTCTTTTGGA TGAAGTGGAG AAGGCGCATA GTGATGTGTT CAATATTCTG CTGCAAGTAC TTGATGATGG ACGCTTGACT GATGGTCAGG GCCGTACTGT TGATTTTCGC AATACTGTTA TTGTGATGAC ATCAAACTTA GGTTCACATC AGATCCAAGA ACTCAGTGGA GACGATTCTC CGGAGGTGTA TACGCAAATG AAGGCGGCAG TGATGGGGGT GGTGCAGGCG CATTTTCGCC CAGAGTTCAT TAACAGGTTG GATGATATTG TTGTTTTCCA CCCGTTGGAC AAGGCGCAAA TCAAGCAGAT TGCGCGGATT CAACTGCGGG GGCTAGAGAA GCGTCTCGCT GAATCTGAGT TGAAACTAGA TTTGGATGAT CGTGCGCTGG AATTGCTTGG TAATGTCGGA TTTGATCCCG TATATGGTGC CCGCCCGCTG AAGAGAGCAA TCCAATCTCA GCTGGAGAAT CCCTTAGCGC AGCAGATCTT AGCTGGAGCG TTCGTCAGTG GAGATACTGT GCAGGTGGGT GTTGATGGAG GGAAGCTTGT ATTCGCTAAG GTGTGA
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Protein sequence | MRMDKLTSRF QNALADAQSL AVGRDHTIIE PVHVFSALLD QQGGSTRPLL VQAGVNVPLL RERLTEILEA LPKVSGQTVN VSPSNELSRL FHRTDKLAQQ HGDQFMASEW FVLAVVDDSG GLGQALRAAG AEKKKIEAAI DKLRGGETVQ TENAEEQRQA LEKYTIDLTA RAESGKLDPV IGRDEEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GLRSKRLLSL DLGALIAGAK FRGEFEERLK GVLNDLAKNE GRVILFIDEL HTMVGAGKAD GAMDAGNMLK PALARGELHC IGATTLDEYR KYIEKDAALE RRFQKVFVGE PTVEDTIAIL RGLKEKYALH HGVEITDPAI VAAATLSNRY ITDRQLPDKA IDLMDEAASR IRMEIDSKPE ELDRLERRLI QLKIQREMLK KEKDEASKQR LADLERDIEV LDREFSDLEE VWRSEKAALQ GATKIKESIE QAKLDLEAAQ RRQDYAKMSE IQYGVLPALE KQLVAASQAE QHDFTLVQEK VTAEEIAEVV SRWTGIPVSK MLEGERDKLL RMEADLGRRV VGQEEAIKVV SDAVRRSRTG LSDPNRPSGS FLFLGPTGVG KTELCKALAE FLFDSQDAMV RIDMSEFMEK HSVARLIGAP PGYVGYEEGG YLTELVRRRP YSLILLDEVE KAHSDVFNIL LQVLDDGRLT DGQGRTVDFR NTVIVMTSNL GSHQIQELSG DDSPEVYTQM KAAVMGVVQA HFRPEFINRL DDIVVFHPLD KAQIKQIARI QLRGLEKRLA ESELKLDLDD RALELLGNVG FDPVYGARPL KRAIQSQLEN PLAQQILAGA FVSGDTVQVG VDGGKLVFAK V
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