Gene Xfasm12_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1711 
Symbol 
ID6121670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1781638 
End bp1782165 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content55% 
IMG OID641649689 
Producthypothetical protein 
Protein accessionYP_001776242 
Protein GI170730809 
COG category[S] Function unknown 
COG ID[COG3656] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.560041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTA CCCTGACGAT TGCACTCAGC GGTCTGCTGT CCATGCCGAC CTACGCCACC 
ACACTGAACA TCACCATCGA AATACCCACA CTCAGCGTTG CCGAATATCA CCGCCCCTAC
GTTGCAATCT GGATTGAAGA TGCCGATCAG AAAGTCGCAC ATAACTTGGC CATCTGGTAC
CAACAACGTA ACGGCGACAA AACACACGGC ACCAAATGGT TACCAGAACT GCGCCAGTGG
TGGCGCAAGA GCGGCCGTAC CGTAGAACTG CCTATAGACG GTGTCACCGG ACCCACTCGG
CCCGCTGGGC GGTACACCCT GTCCTTAGAC GAGCAAAAAC AACTCAAACA CCTACCACCA
GGAAAGTACA CCCTGGTTGT CGAAGCCACA CGTGAAGTCG GCGGGCGCGA ACTACTAAAG
ATTCCATTTA CCTGGCCAGT CACAACCATA CAGACGGGTC AAGCAGTGGG TAAGAGTGAA
CTCGGCACCG TCACCTTGGC TGCCACCTCG AAACCCAAAC CTCATTGA
 
Protein sequence
MRITLTIALS GLLSMPTYAT TLNITIEIPT LSVAEYHRPY VAIWIEDADQ KVAHNLAIWY 
QQRNGDKTHG TKWLPELRQW WRKSGRTVEL PIDGVTGPTR PAGRYTLSLD EQKQLKHLPP
GKYTLVVEAT REVGGRELLK IPFTWPVTTI QTGQAVGKSE LGTVTLAATS KPKPH