| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1639 |
|---|
| Symbol | |
|---|
| ID | 6119468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1711128 |
|---|
| End bp | 1711481 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641649624 |
|---|
| Product | type IV fimbriae assembly protein |
|---|
| Protein accession | YP_001776178 |
|---|
| Protein GI | 170730745 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAA CAAGTACGCG CCAGGGTATT CTGTCGCTCA CCCTGAAAGA CAGGGCGGCG
CTCTATAGCG CCTATATGAT GTATATGCAA AATGGAGCGA TTTTCGTCCC TACGCCCAAA
CGTTATTTCC TTGGTAATGA AGTATTTTTG TTGCTGACCC TCCCTGATTC CAGCGAGCGC
TTACCGGTTG CTGGCAAAGT GGTCTGGTGT ACTCCCGTTG GAGCCCAAGG CAATCGTGTT
GCGGGTATCG GTGTGCAACT GCCCGATGGT CCAGGAGGGG AAGTGGTGCG CAATCGCATT
GAGACGTTGC TTGCCGGCAT GTTCAACTCA GATAAGCCAA CGCACACAAT GTGA
|
|---|
| Protein sequence | MSTTSTRQGI LSLTLKDRAA LYSAYMMYMQ NGAIFVPTPK RYFLGNEVFL LLTLPDSSER
LPVAGKVVWC TPVGAQGNRV AGIGVQLPDG PGGEVVRNRI ETLLAGMFNS DKPTHTM
|
|---|
| |