Gene Xfasm12_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1621 
Symbol 
ID6119449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1694201 
End bp1694629 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content56% 
IMG OID641649605 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_001776160 
Protein GI170730727 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.376219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATAC TGGCCGTCGG AACCGCAGCC ACCCTCACTA TCATGGCGTT GCAACGCAAC 
CTCACATACC TATACATGCC CTCAGAAGTA CTACGTGGCG ACACGGCCCA GCAAACACAT
TTCAGACTCG GCGGCATCGT GGAAAAAGGA TCATTCCAAC GCACCTCCGG CACCCTGCAC
ACCCGCTTCA TCGTCACCGA TGGCAACGCA CGCCTCCAAG TACGCTATGC CCGCATCCTC
CCAGACCTGT TCCGCGAAGG CCAAGCAGTC GTCGCAACCG GACAGATGCA ACATGGCATC
TTCATTGCAG AAAACATCTT GGCACGGCAC AACGAAACCT ATACACCGCG GCAACTAGCC
AACAAAATGC AACCCACACC TACGCAACAC ACCCACCTAG ATACCCCCAT CGCCGAAACA
ACACCTTGA
 
Protein sequence
MLILAVGTAA TLTIMALQRN LTYLYMPSEV LRGDTAQQTH FRLGGIVEKG SFQRTSGTLH 
TRFIVTDGNA RLQVRYARIL PDLFREGQAV VATGQMQHGI FIAENILARH NETYTPRQLA
NKMQPTPTQH THLDTPIAET TP