Gene Xfasm12_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1517 
Symbol 
ID6119958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1582402 
End bp1582794 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID641649506 
Productouter membrane protein 
Protein accessionYP_001776062 
Protein GI170730629 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.718257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATC TCCTACTAGC CGCTGCCCTT CCTCTCCTCT TTACCGCCGG TTGCAGCATC 
ATCTACAAAC AGCCAATTTA TCAAGGCAAC TTGATCAAAA AGGAAGCTGT TGACCAATTA
AAAATTGGCA TGAATAAACA AGAGGTCGCC ATGCTGCTTG GTACGCCGTC GATCTCCGAC
ATATTTCACA CAGACCGTTG GGACTATACA TCCACACAAC GTATCAACCG CGTAGCGCAC
ACTGAAATCA AGAATCTCAC CGTTTACTTT CAGAACGACC TAGTCACCCG ATGGGAAGGA
GACTACTTCC CGAACCAAGA TGAGAAACTG GCAGAATCGG CACGCAAGCA ATTCGGTCCA
AACCTCTCCA GAAAAGAACA CGGTAATCGC TGA
 
Protein sequence
MRNLLLAAAL PLLFTAGCSI IYKQPIYQGN LIKKEAVDQL KIGMNKQEVA MLLGTPSISD 
IFHTDRWDYT STQRINRVAH TEIKNLTVYF QNDLVTRWEG DYFPNQDEKL AESARKQFGP
NLSRKEHGNR