Gene Xfasm12_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1467 
Symbol 
ID6121330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp1538082 
End bp1538708 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID641649460 
Productpyrazinamidase/nicotinamidase 
Protein accessionYP_001776016 
Protein GI170730583 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.821646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCTG AAAACGTCGC ATTGATCGTC GTCGACCTAC AACCTGATTT CATGCCAGGC 
GGCACACTGC CATGCGAGGA AGGTGCATCC ATTGTCCCCG GAATCGCCGC ACTCTTGGAT 
GCGCGCCAGT ACTCTACGAT CGTTGCAACA CAAGATTGGC ACCCTGCTGA CCACGTTTCG 
TTTGCCTCAC AACATCCCTC ACAGCAGCCC TTTGAGCAAA TCACCCTGCA TGGCCAACCC 
CAGACCCTAT GGCCCGATCA CTGCATCCAG GGCAGCGCCG CAGCGGCGCT TGATAGCCGT 
GTTGATTGGT GCGCGGCTGA TCTGATTTTG CGCAAAGGCA CCTGCCGCCA CACCGACTCT 
TATAGCGCGT TCCGCGAAAA CCACGGTCCC AACGGCGACC GCCCGGCCAC TGGTCTGGCT 
GGCTGGTTGC GTGAGCGCGG TATTGAAGAA GTCCACGTCT GCGGGCTGGC CCGTGACTAC 
TGTGTTCTGT GGACTGCGCA GGATGCCCTC TCGGCAGGAT TCAAAGTCCG TTTTCTATGG 
TCGCTGACAC GTCCCGTCAC CCCTGAGGGT AATACCCCAA CCCGTAAAGC GCTTGAAACC 
CTAGGGATCA TCATTGATCA CGGCTGA
 
Protein sequence
MHPENVALIV VDLQPDFMPG GTLPCEEGAS IVPGIAALLD ARQYSTIVAT QDWHPADHVS 
FASQHPSQQP FEQITLHGQP QTLWPDHCIQ GSAAAALDSR VDWCAADLIL RKGTCRHTDS 
YSAFRENHGP NGDRPATGLA GWLRERGIEE VHVCGLARDY CVLWTAQDAL SAGFKVRFLW 
SLTRPVTPEG NTPTRKALET LGIIIDHG