| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1462 |
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| Symbol | |
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| ID | 6121325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1532399 |
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| End bp | 1533166 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641649456 |
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| Product | 3-alpha-hydroxysteroid dehydrogenase |
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| Protein accession | YP_001776012 |
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| Protein GI | 170730579 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.759595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGC AAAATAAGAC GGTGGTCATT ACTGGCGTGG CGTCTGGTAT TGGTTCGGAG
GTAGCACGGT TGGCACGTTT TCACGGTGCC ACGGTGATCG GTATCGATTG TCGACCAGTC
ACCATAACGT TGCATGGATT TTTCCATGCT GATCTTGGTG ATCCTGCCTC CATTGATGCG
TTAATCGCGC AGTTGCCCGA ACGTATTGAT GTGCTGGCTA ATATTGCCGG TGTGCCGGGT
ACGGTGGCGG CTGATCTCGT TGCCAAGGTT AATTACTTGG GGTTGCGTCA TTTGACTCAA
GCCTTGCTGC CGCGCCTCGC GCCGGGAGGC AATGTCATCA ACATGACTTC GCTTTTGGGT
GCCGAATGGC AGCAACGCTT GGAGTTGCAC AAACAATTAG CTGCCACGCC GGATTTCGCT
GCGGGGCTGG ATTGGTTGGC GGCGCATCCG GTGCCGGCTT CCACTTGCTA TCAGTACTTT
AAGGAAGCAT TGATCGTCTG GACCATGCTG CGGTCGCGTG ATTGGTTTGC TGGGCATGGA
GTGCGAGTGA ATAGTGTGGC GCCTGGGCCG GTCTTTACTC CGATTTTGGG TGACTTTGTC
AGCATGTTGG GGCCGGATCG GGTACAGGCT GATGCGAGCA AGATGAAGCG GCCTTCTTAT
GCGGATGAGG TTGCTGAGGC GGTGATCTTC CTGGCCAGTG ATGCGGCCCG CTGGATCAAC
GGTGTCAATT TGCCGGTTGA TGGGGGCTTG GCTGCCACGA CGATTTGA
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| Protein sequence | MNLQNKTVVI TGVASGIGSE VARLARFHGA TVIGIDCRPV TITLHGFFHA DLGDPASIDA
LIAQLPERID VLANIAGVPG TVAADLVAKV NYLGLRHLTQ ALLPRLAPGG NVINMTSLLG
AEWQQRLELH KQLAATPDFA AGLDWLAAHP VPASTCYQYF KEALIVWTML RSRDWFAGHG
VRVNSVAPGP VFTPILGDFV SMLGPDRVQA DASKMKRPSY ADEVAEAVIF LASDAARWIN
GVNLPVDGGL AATTI
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