| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1371 |
|---|
| Symbol | |
|---|
| ID | 6119892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1428600 |
|---|
| End bp | 1429214 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641649375 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001775931 |
|---|
| Protein GI | 170730498 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTAA TCAGTAACGA CTTCAAAAAT GGCCAACCCA TCCCGGTTGA ATGCGCTGCT
GGCCAAACTG ACGGCTTTGC CCCCAACCGT AACCCGCACC TAGCATGGGA CGACGTTCCA
GAAAACACCC GTTCCTTCGC ACTGCTGTGT ATAGATCCAG ACGTACCGAG CATTCCAGAA
ACTATCGGTC GTACCGATAT GGAAATCCCA GTGACACAAC CACGTATTGA CTTCGTGCAT
TGGGTCATGA CTGACATCTC TACCAACCTA CGTATGATTG CCCACGGCAG TTGCAGCGAT
GGCTTTGTGG TAGGCGGCAA GACCATGCCA CCTGGGCCAG CAGGCACACA CCAGGGCTTG
AACGACTACA CGAAATTCTT TGCCAACACC CCTGAAATGG CCGGTGATTA TTATGGCTAT
GACGGCCCGT ACCCACCGTT CAACGACCTG CGCATACACC GCTACCTCTT CCGTCTGTTC
GCACTTGACC TGGAACACTT GCCCCTTCCC AAACGCTTTG ACGGCCCCAC ACTCCTGCGC
ACGATACAGG GCCACGTATT GACCGAAGCC ACCCTATACG GGACCTACAC CCTCAACCCC
AAGGCCCAAG AATAA
|
|---|
| Protein sequence | MHLISNDFKN GQPIPVECAA GQTDGFAPNR NPHLAWDDVP ENTRSFALLC IDPDVPSIPE
TIGRTDMEIP VTQPRIDFVH WVMTDISTNL RMIAHGSCSD GFVVGGKTMP PGPAGTHQGL
NDYTKFFANT PEMAGDYYGY DGPYPPFNDL RIHRYLFRLF ALDLEHLPLP KRFDGPTLLR
TIQGHVLTEA TLYGTYTLNP KAQE
|
|---|
| |