Gene Xfasm12_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1351 
Symbol 
ID6119871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp1409720 
End bp1410352 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content50% 
IMG OID641649354 
Productribonuclease T 
Protein accessionYP_001775911 
Protein GI170730478 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0135397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAT CCATCACACC ACCTACACAC CCGCCAATGT CCCAACGCTT CCGCGGCTAT 
CTGCCTGTAG TGGTCGACGT TGAAACGGGA GGCTTTAACT GGAACCACCA CGCCCTGCTA 
GAGATCGCCT GTATCCCCAT TGAAATGGAC GATACTGGAA GGCTCTACCC CGGAGAAGTC 
ACGAGCACCC ATGTCATTCC AGCACCTGGT ACCGACATCG ACCCCAAATC ACTGGAAGTC 
ACTGGGATCA TACTCGACCA TCCATTTCGC TTCGCCAAGG AAGAAAAGCT AGCGTTGGAA 
CATATATTCA CACCAGTGCG CACCACAATG AAGAAATACA AATGCCAGCG CGCAATCTTG 
GTAGGACACA ATGCGCATTT TGACCTCAAT TTCCTCAACG CAGCAGTAAC GCGAACCGCA 
TACAAACGAA ATCCATTTCA TCAATTCAGC GTATTTGACA CTGTCACTCT AGCAGGCATG 
GCCTACGGTC AAACCGTATT AGCACGTGCA GTACAAGCCG CCGGCTTGGA TTGGAACGCA 
ACTGACGCAC ACAGCGCAGT CTACGATGCT GAAAAAACAG CTCACCTATT CTGCACAATC 
ACCAACATAT GGCCATTAAT GGTTGCTGGA TGA
 
Protein sequence
MNQSITPPTH PPMSQRFRGY LPVVVDVETG GFNWNHHALL EIACIPIEMD DTGRLYPGEV 
TSTHVIPAPG TDIDPKSLEV TGIILDHPFR FAKEEKLALE HIFTPVRTTM KKYKCQRAIL 
VGHNAHFDLN FLNAAVTRTA YKRNPFHQFS VFDTVTLAGM AYGQTVLARA VQAAGLDWNA 
TDAHSAVYDA EKTAHLFCTI TNIWPLMVAG