13 homologs were found in PanDaTox collection
for query gene Xfasm12_1305 on replicon NC_010513
Organism: Xylella fastidiosa M12



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010513  Xfasm12_1305  plasmid-related protein  100 
 
 
280 aa  575  1.0000000000000001e-163  Xylella fastidiosa M12  Bacteria  normal  0.810872  n/a   
 
 
-
 
NC_010577  XfasM23_1037  SPP1 family phage head morphogenesis protein  96.79 
 
 
281 aa  559  1e-158  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2223  hypothetical protein  28.83 
 
 
291 aa  101  1e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.472892  n/a   
 
 
-
 
NC_009720  Xaut_3630  SPP1 family phage head morphogenesis protein  32.09 
 
 
258 aa  94.7  1e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2390  Phage putative head morphogenesis protein, SPP1 gp7  32.09 
 
 
213 aa  88.6  9e-17  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1826  SPP1 family phage head morphogenesis protein  29.5 
 
 
229 aa  86.7  4e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0313682 
 
 
-
 
NC_012856  Rpic12D_2264  phage head morphogenesis protein, SPP1 gp7 family  31.02 
 
 
210 aa  85.5  9e-16  Ralstonia pickettii 12D  Bacteria  normal  0.474066  hitchhiker  0.00211292 
 
 
-
 
NC_007794  Saro_2720  phage Mu protein gp30-like  29.92 
 
 
273 aa  84.7  0.000000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.331056  n/a   
 
 
-
 
NC_011080  SNSL254_A1156  phage Mu protein F like protein  34.96 
 
 
205 aa  77  0.0000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.00000000223289 
 
 
-
 
NC_009436  Ent638_0801  putative bacteriophage protein  26.9 
 
 
250 aa  66.2  0.0000000006  Enterobacter sp. 638  Bacteria  normal  0.864725  normal  0.0129272 
 
 
-
 
NC_010465  YPK_1224  putative head morphogenesis protein SPP1 gp7  25.65 
 
 
293 aa  58.5  0.0000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2941  hypothetical protein  25.65 
 
 
264 aa  57.4  0.0000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0855  hypothetical protein  40.48 
 
 
186 aa  42.7  0.006  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>