Gene Xfasm12_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1240 
Symbol 
ID6120462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1304444 
End bp1305304 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content49% 
IMG OID641649252 
Productheat shock protein HSP33 
Protein accessionYP_001775811 
Protein GI170730378 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC ACGACTCCCT GACGCGCTTT CTGTTACCTC ATGCCGTAGT GCGCGGTATC 
CATGTCAGTC TTAACGAAAC TTGGAGCAAT ATCCAGGAAA AAACCCACTA TCCTGCATTT
GTAAGCCGGC TACTTGGTGA AGCTGTAGTA GCGGCGGCGC TATTTGCCAA TCACACCAAG
GTAAATGGAC GCCTCTCAGT GGCATTGCAC AGCAAAACAG CGCTGCGCAC ATTGTTTGCC
GAATGCACGA CATCCGGCAC CTTGCGCGGC ACTGTCCATA TGGCCGAGGA CATTTCTCAT
TCCGAAGCAC CAACCTGTTT GCGCGAATTA GATCACAATG CCCTGCTGGC AATCACTGTC
GAAAGTTCAG GACTCAATCC AGATGAGCTA CAACGTCACC AAAGCCTCAT CGCACTGGAT
GCAGCCAACT TGACTGAAGC ATTCGAAATT TATTGCCGCG ATTCTGAACA GACGCCAATC
AGGATCTTAC TGGCAGCCGA AGGAAAGCGG GCGGCGGGGC TATTATTGCA AAAATTGCCT
AGTCATACTG ACGATGTGGA TGGCTGGCCA CGCATTTGCG ACCTATTCGA CACCCTGCAA
GCATCTGAAC TGCTCGAACT CTCCGGACAA GTTCTATTAC ATCGTTTGTT TCACAAAGAA
AATCCACAAC AACTACAAAA ACGTCAGCTA CGCTTTGGCT GCTCCTGTTC ACGCGAAAAA
GTCGCGGCAA TGTTGCAAGG ACTTGGTGAA AACGAAGCCC GCGCCACTCT CGAAGCTAAC
GGCAGAATCA AAGTAAAATG CGAATTTTGC GGACAAAAAT ACCACTTTTC TTACAAAGAA
ATTGACGCAT TGTTTCCTTA A
 
Protein sequence
MTDHDSLTRF LLPHAVVRGI HVSLNETWSN IQEKTHYPAF VSRLLGEAVV AAALFANHTK 
VNGRLSVALH SKTALRTLFA ECTTSGTLRG TVHMAEDISH SEAPTCLREL DHNALLAITV
ESSGLNPDEL QRHQSLIALD AANLTEAFEI YCRDSEQTPI RILLAAEGKR AAGLLLQKLP
SHTDDVDGWP RICDLFDTLQ ASELLELSGQ VLLHRLFHKE NPQQLQKRQL RFGCSCSREK
VAAMLQGLGE NEARATLEAN GRIKVKCEFC GQKYHFSYKE IDALFP