Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1145 |
Symbol | |
ID | 6119670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1221659 |
End bp | 1222246 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641649165 |
Product | phage-related baseplate assembly protein |
Protein accession | YP_001775727 |
Protein GI | 170730294 |
COG category | [R] General function prediction only |
COG ID | [COG4540] Phage P2 baseplate assembly protein gpV |
TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACAGA CACTCAACGA ACACACCCGC CAATTAGCAC ACCTGATCCT CCAAGGGACC GTCGCCGAGC TAGACCCTGC TACCGCCTGC GTGCGGATTG AAGCCGGAGA ACTGCTCACC GACTGGCTGC CTGTGATGGC CTCACGTGCC GGAGCCGACC GCTCCTGGTG GCTGCCACAC CTGGGCGAAC AAGTCATTGC ACTGTGCCCC AATGGGGATT CGGCACTGGG CATCGTCTTG CCTGGCAGCC TCTACCAAGA GACCTTCCCT GCGCCCAGCA GCACCGCCCA CCAGCCCTGC CTGCTGTTTG GCGACGGAAC ACGCATCACC TACGACCGCC AAGCCCACGC CCTGACCGTG GATGCCTCCG CCGCATCCGG CACCGTTACC CTGATCTGCG CCACGGCTAC CCTCAATGCC AGCGACCGCC TCACCTTGGA CACGCCCAGC CTCCACCTCA CCGGCAACCT CACCGTAGAA GGCACCATTC AAGCACAAGG CGACATCACC GCCGCAGGCA TTGGCCTACA ACGTCACCAC CATACGGCCC AAGGACCCAA TGCGCCCACC ACCCCCGCGC AGGGATAG
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Protein sequence | MRQTLNEHTR QLAHLILQGT VAELDPATAC VRIEAGELLT DWLPVMASRA GADRSWWLPH LGEQVIALCP NGDSALGIVL PGSLYQETFP APSSTAHQPC LLFGDGTRIT YDRQAHALTV DASAASGTVT LICATATLNA SDRLTLDTPS LHLTGNLTVE GTIQAQGDIT AAGIGLQRHH HTAQGPNAPT TPAQG
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