| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0925 |
|---|
| Symbol | |
|---|
| ID | 6120784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 997395 |
|---|
| End bp | 998300 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641648970 |
|---|
| Product | aspartyl/asparaginyl beta-hydroxylase |
|---|
| Protein accession | YP_001775534 |
|---|
| Protein GI | 170730101 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.60975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAT GGTCTTTGAT AATCCTGTTT GTCGCATCGG TCCTTTACAC CCACTTCAGA
GGCCGTGTTC GCCATCGTTT AAGACGACAG CTATTTGACC ACTCTACCTT CATGGCACCT
ATTAATGCAC TGATGTACCT ATGCTCACGC ATACCCACCA CACCGTTCAT CGACCCCGCC
ACGTTCTTCC CCGAGCTGAT GCCCTTGCGC ACTCAATGGA CTACGATCAG GGATGAAGCA
CTCGCATTAC AACGCATACA GAAGATACGA GCGGCCGAGG GCCATACCGA CGCAGGATTC
AACTCGTTCT TCCGACGTGG CTGGAAACGC TTCTACCTAA AGTGGTACGG CACCACACAT
CCATCTGCTA TCGCGCTGTG TCCAAAAACC ACGGCACTGC TGAAAAACAT CCCTGCAATC
AAAGCCGCCA TGTTCGCCGA ACTGCCGCCG GGTGGTGACT TGCGTCCACA CCGCGACCCA
TTCGCAGGTT CAATGCGTCT GCACTTAGGA TTGGCAACCC CAAACCACAC AAGCTGCTTT
ATCGACGTCG ACGGTCAGCG CTACAGCTGG CACGACGGCG AATGGGTCAT GTTCGACGAG
ACCTACATCC ACTACGCACG TAACGACACA GAGCACAATC GCATCATCCT ATTCTGCGAT
ATCGAACGCC CAATGCGCTG GCGCTGGGCA CAAGCATTGA ATCGCTTCGT TGCCAAACAT
CTACTCGCTG CCGGCACCTC ACCTAATCAA GCAGGTGACC AAACCGGCGG CATCAACCGC
ATGTTCCATC ACTTCTACGC ATTACGCCTG AAAGCAAAAG CACTGAAACA ATATAGCAAC
ACCCTGTACC AAACGATCAA ATGGAGCCTG TTCACCCTAT TTGTCATTGG CATCTTCCTG
TTGTAA
|
|---|
| Protein sequence | MIKWSLIILF VASVLYTHFR GRVRHRLRRQ LFDHSTFMAP INALMYLCSR IPTTPFIDPA
TFFPELMPLR TQWTTIRDEA LALQRIQKIR AAEGHTDAGF NSFFRRGWKR FYLKWYGTTH
PSAIALCPKT TALLKNIPAI KAAMFAELPP GGDLRPHRDP FAGSMRLHLG LATPNHTSCF
IDVDGQRYSW HDGEWVMFDE TYIHYARNDT EHNRIILFCD IERPMRWRWA QALNRFVAKH
LLAAGTSPNQ AGDQTGGINR MFHHFYALRL KAKALKQYSN TLYQTIKWSL FTLFVIGIFL
L
|
|---|
| |