Gene Xfasm12_0885 details

Gene Information

• Locus tag: Xfasm12_0885
• ID: 6120744
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 955968
• End bp: 956429
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641648935
• Product: peptidoglycan-associated outer membrane lipoprotein precursor
• Protein accession: YP_001775500
• Protein GI: 170730067
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3133] Outer membrane lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATAC GTGTCCTCCC CTTTGCTCTG CTTGCAACTG TTACTATAGC TGGTTGCAAT 
ACAGCTCGGC TTGGTTATGG CGGTGGGTAT GGTGGGGGTT ACAACCAACA GCGTTGCATT 
GACTGTGGTG TTGTGACTCG AATCAATGTT GTGCAGTCCA ACCGCTCTGC TCCGACGGGT 
GTCGGTGCCG TGATCGGTGG CGTTGTCGGC GCAGTGGCTG GACGCCAGAT CTCCAAGAAG 
ACTGGAGGAA GTAAAGGTAA TCAAAACATA TCCACGTTGG GTGGGACTGC TGTGGGTGCC 
TTAGCGGGCA ATACGATCCA GAACAATGTC ACCAAAGATA GCTACGATAT CCAGGTGCGT 
ATGGACGATG GCCGCGTGAT TGTGGTCAAC CAAGCTGATT TGGGTGGTGT CACTGAGAAG 
GCTTACGTGC GCTTGGTTAG TGGCCGTGTG GTATTGCGTT AA 

 

Protein sequence

MNIRVLPFAL LATVTIAGCN TARLGYGGGY GGGYNQQRCI DCGVVTRINV VQSNRSAPTG 
VGAVIGGVVG AVAGRQISKK TGGSKGNQNI STLGGTAVGA LAGNTIQNNV TKDSYDIQVR 
MDDGRVIVVN QADLGGVTEK AYVRLVSGRV VLR